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Human element [ hs1541 ]


Position: chr2:211,664,571-211,666,475 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: CPS1-IT1 - ERBB4

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AAGCGGTTTCTGTCCTCTCActgcattcttactctgttcttccctgcttaaccagactag
ttctatttttatcattttggatattttagttccacaaagcactttcttttaggtaaatgg
atgaaagagggtagaatgcagggagataattgagtgctttaacaaagtctgaaagccacc
agtctgtgtgacaacagtctgcattacctccccactgaccaacttgccagccccatccct
taaaaccctcttgccttttaatttatgcttcatcacactcatctaaacacttacttgatt
aaaaaaaaaaaagacggggttttactatgctactgatcatagaaaaatattccatttgaa
ttaggccaattctaaatttgtttcttcttggattcatgaatttgctttctgttgcacagt
tgtttcctagaatcgagatactgaattctaatcttttcagtttttcatgcttatttccag
gtggttggcttttttcccttgctattcacagcgatcccatccttttcatcggtatggcag
gtggccttataaaaatgagcatctgtgaggctttctaagagacccttcagggataaattg
agagccacattttgacctgtttatgtttggggtatttctttaaaaatcgtctttccagat
tactttaaaaatgaaccatacaattctgtgcactaactaggcaagtattctctagtcagg
aaactcagctgaatgagaactggaatctaaaataaaagttgtttctatttgcctaagtgc
cattctcaatataacatgctttttcaaaaagattcattaatatgcattttaagattttaa
tttagaaacagtctatcattgatcaccactctgtttacattttagcagtctgctgagagt
acgctgttagattcttttatatgttgcttttccttcttcctcccttctttattagcctca
acaccttcctctgggatctttattaaaacgatcaagggtagaggttttagatttcataaa
tattgcaacagtttcatgctctttggagaatgactcctttagatcaaaatggcttcctat
gggggcagagagtttttcaaagcctgcaaagtgcaaagagtaacacaaaaagctaccctc
aataaacacacaaacataatattacgtggggccaataaataagtgtcattatgtaagagg
tactcagatcttttaaaaattttattcaaaattatgaagctgaacatgctagagtctctg
gcctgcacaacttctgatgactgggataattttgttaaaaagctaaagggaggtctgtta
gccttttaagaaattgatcactaccttcataaaagtctctggtgaggaaatattccattg
tgctgaagtctgtatgttttgaaaaagctgattagagttctttttttttttcttttttct
tttttttggctcattcagcctcaatgtgtttgaggtgcctgtagggagtatgggaaaagg
agttgggaacaagaagttatataataaatgatagaaatcactatattggcacattataac
ttaggtcctattccaaatcatatacccatcacaaataggtgatatttgtgataggaccat
actaatttttagtatgttacagagttaaaaaatttaaagcaacagagacggaaagcctgg
tcaaaccacttagaggtttggataactctttaacaagtaaatgaaacaaaatatttaatc
ttttagtgtttcatatgatggttagatccaggacttagaatgttgggctgctgagatgga
atagagagaggaatttgtgtggttcaacttctcaccttgtgctgtagaacctggaattta
cagagcaagatttaaataaatggaaAAAAGAATAGAAGGGCCCCA
Primer
(+)aagcggtttctgtcctctca
(+)tggggcccttctattctttt


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