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Human element [ hs1540 ]


Position: chr12:103,405,110-103,408,796 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ASCL1 - C12orf42

Timepoints:
e11.5

Expression Pattern
forebrain (4 out of 4 embryos) 
midbrain (mesencephalon) (4 out of 4 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Fasta sequence
CACACCAGCGCTGTTTCTTtacactccccaagaaaaagacatactccccaagaaaaaaga
ttcatgtgtacactccccaagaaaaaaacatatattggaggatagaagacttgagttata
attttcatatttgccaccaatgagcacagccatgtatttacttatttatcaaatatttat
tgaatgtcttgtatgttccaggcactgtattagatagatacactatagcaaagctcctat
tcttgtagagtttatatttggggatgggacaggcaataaataagcttcgaatgcctaata
ataatgtaacaatgatgatagcaacaaatataattataactgctgtctagagtaaataat
caattttaataattaataataatacatgatatacagaaatttcaagaggacaacagatac
agttgagcttatagagtgataacagagatggtttcctaagacagcggtctatgacctgag
tctcaaatagtgagaaggatagagtcccaaaaagatctgggggcagggctttccaggcag
ggaggagagcaaggcagaggtcctgaggctggagtgagtttgttttatctgaggaacaaa
aaaaggtagatgtggctggaatgaactgagactgggagagacaggctggagatcagctag
ggccagattatcctggacctgcaggcactgatggggagcttgattttattttaaatgcag
tgtgacatcctgcaagtcattctgtttctgtcaaatggcaaggatggggtgatgaggatg
gagcagctgaatgattctcacagtctggaatgctaagtctaaccttatctaattcaggac
ctgggagaggtgctttgagtatctacagtgaggaaagtaaggtagcaaaaagacctcaga
tcctgcctcccagaatcctgtcactagggctggggaaagaaaggagtggagagcgttcag
ggctgggatgctatattcctgtaaaaccagaacctgttcttcttccacttttaatttttg
aggtgcataggattttttttcactttgacaatctgcttctcatattactttagctttctg
tagtgagaaaaagcacaggattaggggtcaggtgcctcaggctccagaaccccatctgtt
agtaaatagctaacctgatccagaccattcccggatctgggcctccagaccctcatctgg
ggaccatcattaggattccttctgtgatttgattattttcctccctgccagagccgggga
ggaggctaaacccttgcatgcaagtccaccaaagctgtcctaaaataataaagcaatttc
ctttgaaatggtcagaagaaaagtcaggaggcccttgcaaaatgtgatgaaacccagccc
cagctgaatattaagttagcgaggggtctgcaatgagggtggggggctggggagagaaga
gagatgcagggttggggagagagaaattttaattgcaattgtttggcctgctgatcctag
gcaaatgacaagaagcccccaagcagcctcaaacacagatatttgaaaggcagagacggc
tgggggatggtttggtttctccctcccctctgaggctgtttgaggaacggtctacagtgc
tgacaagcacgggttttggaggccattgaaaagttttgggcctaaatagggtaggcagct
tggcttaagtgttgctaaggaatacctggcaaccagcaacaataggccttttagagaatc
cagggcaaacagtgaccgtggtaatggggtgggcttaagggtctccttgcccggctgggc
ccctcctcttctcacacagaggcctgggcactgggctatgttccggaaattccctgcaca
aagccccattcagtgggaggagggccaatgcgtgtgctttgggggcagtgggggtggaga
caggggatagggagagggcgggggagggggtaccggagaaggagctttactgccaaaaaa
aaaaaaaaaaacctctcaagtctctttcttctcgcaaagactaaaagaggcacagaaagt
gctaagtttgtaaaagagtctgaaaaggttcagaaaagtagcataaaaggaactggggaa
cgccccgtgaattttgaacagagagcagaaaagggaccctaaaaagcaattagtgatgct
gcttgtaaatgaagaggcacctagtttggggtggggagctgagtctggaggtaggtgtgc
aggggtgcagcaggtggtgggggttgaggggcaggtgaggagaatgaagtggggcgggaa
gcgggtgaggggaaggggaggccagtgaagaatggatggatggaaactggggaactgtgg
cctcagtccccactctaaccacatgccttcaggctgctctctccttgggctgtgcagatg
ccccacccactcagtttctgtcccctggtaaggcagccccccgaaagtcatgggtgcctg
ggacagtgaccagcacccagagtctgagcagtctccccagtcccttcagtctctgataac
catgaaagaagccctgacgttctgtgtgagtgtagactgcacactcctcacaagtaggca
aatggcaggatgctccagggagctgggtgtctgcctgcgttcctgggggaggctcacatg
acagtcagtgaaggaaggccagggagccaacaaattagcgctctacaaattccacgtgcc
tgagctgcataacattcatgctgaaataccctactcaaaggctctaaagataataatttt
acatttccagcagaatgtgcacggtgacaattatctgtattcctactgtgtcgcagcatc
aaccgataatcaagagaattatgttccagttgaaagcagatttaaataaacagacactaa
atggaagccaataatagatgtaccaaaatagtccaggcaaggaagcagccattcagataa
agagctgtttagtcgaggagacatgaggcatccagagcgcagagtttacagctctctgtc
tgtggctcagcctgtctgattctttctagctgtcctctgcagacccgaccagaggactat
cctaaactgatccttttcccctcctttccttcctccctcccttctccctcttcctccctc
ttctttgtttcttcaacaaaaattcactatttattatcaacgaggtacatttgggcacca
tcattaaaattaataaaccctacccttctttgatttttgtgtccttctgttcaagattta
aaccggatcatgttggccctgcatggggctagggaggagggtattagtaagttctttcaa
ggaaaaatctaactgctgtttctttaagaagggagaatgggatactaaagagacaaacta
ttggagttctactacatattctttcaatgattgcacatttgttggaggtcactgtgtgtt
ccaggcattgtcctaggtactgtgaattcaaagataaaagcacttgttcctgccctcaca
aagcttccaaccttgcagggaaggaataagcaggcctggtgacagctggatgggcatggg
tacaatgcatgatggaagcaccagagaaatgctctgccggggtaaggtgaaggagacatc
aagaggaggcagctgtgccttgaaggaaaataacttaaatgaatttacaaattcatctgg
aaataatTGTTGAAGCACAGGAACGAG
Primer
(+)cacaccagcgctgtttctt
(+)ctcgttcctgtgcttcaaca


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