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Mouse element [ mm1538 ]


Position: chr17:63,201,276-63,204,288 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Efna5(intragenic)

Timepoints:
e11.5

Expression Pattern
midbrain (mesencephalon) (5 out of 6 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Fasta sequence
CCCCCTGACAAAAGAGGTGGaatggtctgtgaactctgaacacaaggattccctctgtga
agggcacatggtatctacagactatcacaggcaggagaaacagtgtctaactgggcagtt
aaaagaatctctgaaacatggctttcctgaagggcacgaagcagaccttatggaaagaga
aagaaaagccgcatttgcaaacccataagataaaaataggatgagagcagtggccctggt
agcgaaggaaagctcctcctcccaccggctttcccaggaatcctttcaggaatattttaa
accaagaatttcatgtgggaggcacacacgggccctctgtggtgctaaaaggccatcttg
tatattttcatctgagggaaaacaaagaaacaaaaccttatctaaaagattcttaagata
ccctcccccccccacccacacacacaatgtggtcttcaggtagttttcctgaatcccaaa
actaaactttttaaacacattgggacaaactactaggtaatatcaaactactcctaggat
attcttttcaaaagtttgttgtaagtttattttctgaagtatacacacacacacacacac
acacacacacatatatatacatatatatgattaccatctttaaaaatgtctgtgtccatt
ggaggaattttaaagtatttacatatttaacaatttcaaaagttaaagttatctgtaagc
aatgatgaaacaaacaccaacagccaaaatgacttatttcagcttaggataaatgcaaat
cgcgcgccctgcatgctttacatggactgacatgacactgacccaagtggattaataaat
agttcaatttaatagaatttaaatgtctgttcccatttcctatttttttccatgtaagac
aactcttttatacattgtttcacatggttaccatttttctctttctaaatcacatttttg
tcactttaaatttccaacagaaataaattttaaaaaaaagagtaaaaaatgtcacactcc
ttttaacccacacagtctacaacacacacagagcagcagccaacagaattgcacccttat
aaaatactccctagaccaacaaaagaggccaaccaacaccctgcagcaatgcagggggta
tcctcatcacaggggtacaggtaggtatagggtcatgtgaccatggtggtggcaattcta
actggtcatcccagccattttaagtgagaatgaaccacatgttaagaggcagcaggaagc
cctctatccaggctgcacaggaattcacctctaagctgacagtccttctggttcatcttt
ggagcctgtagactccttcttcagcattctgccttccagaatgcatcccagggtgctgtc
tcagcctatcatctgggtcctcaaagggcccatgatcactcccccaccccccagtgccat
tgtcctcagaagtgcctttgcagtgatgcaggcatcagggcttattaaaacccctaaggg
acgtaatccctgaataccactgaaagatctccagctgctaccgtttatgaagaaggctgg
gtgtgggggaggggaggtgcactggggcaggaaggatgggggaagagaagaatttagaca
agggtgagttatccaaacacagcccccatcaagaaggacagagtcgagctttatcagctt
aagctttccgcctcctttcagaaactgtttctcccttcaactcctattaattcttcttta
tagctgcaggcagcacaaggctagagggaggctctaaaagtgtgtaaaaactagaaagac
tacccggatgaagcacctggaaatcaccaaatatcttccctagaaaatcagggtaggaaa
agaaaaatggttctcgtggaaaagaattcgagcaactttcagtccggctccccttctgct
ctcttttcaaaggtcttttcatcccattaagttaagctgattaataaaaatgcagcagtt
tgctcaaggatcctttagaagcagtgatacaggctgaaagatgcaagcggaagggttttg
tcctggagacaatagaggggtcacttcttaaacccatccttgtcattccccattagagac
agtcaccttgctcagatgccccaaacacagccttgctacttcctctcgtctagtaacctt
cggagggtgggtgggtggaagctgtgaccatttaatacttaggagaaagaaaaacattta
gaggcaacacacagtgggaacattttacttcctctcaagagattactccaactagtacat
aggctgcagacgtggaagacccactagagaaaaggcaatgttattcaaagaagtctccac
gtaaacacaacagtatacttcttcctttcatgagtaactatttaggacgccatccagaaa
cattgttcagtgagtacctgacacacagcacatgcccaagcaagagttaaccaatcgtat
atcccccacaaatgttaaatgattgtggtcttctgaagaaggggagggggaatgtcggtt
acataaaactgtgatgagcaagtattcagacataagctgaattgatttaagaaacaatgt
agacaatatctattgtgtgaaaaccttggaacaaggagctgcagatggacatatctaccg
tgaacctgcatagcactaaataggtcatctgaattttatccaaagtgttcccagacgact
gaattaaatttgtacttcatgatatgcttaaaagtccccaaagtggcactcactgtggat
gcgttaataaccctcccaaatgtctgtctatcccctctttatttgtccacatcagggctt
tccaagctattttaaccaatctgtctgcactgcattcaatggggtttggatgccatcacc
aaatttatcctaagataccagaccaaataaatatctttgtctgatcagacttcaaagaac
ttggcaggtaaaattttaaatctcattggtattccatacccttcaagtcattaGAGAAGC
TCACCCACCTGTC
Primer
(+)ccccctgacaaaagaggtgg
(+)gacaggtgggtgagcttctc


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