Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1535 ]


Position: chr18:54,770,039-54,772,901 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 9430076G02Rik - Zfp608

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGGTGGGGCCAGAAGTAAAAggagaataaataggaatctgaaggggtcggggagagatgc
ctgagaactacactgtgggaaaattgaggatgatcagatagcaaggtggagtctagaaga
tgctccttacaatagagtggatagagggacagctgcatcttcttgggtgtgtgtctggca
gttgtcggcattggctcaggaatcagactggcagggtgactcttttcatctcagaaagag
atgaggaagtctttgcctgggcctatgggaagagtcagcctaggtgttggaagagaccca
gagaaaattgatgtggtgcacagactaccttcaatgccataaagatagggagtccaatta
cgggcagcagtggacgtccaggacagactagacactatgcctccttcaccatatcacagg
acgaggttcctcactctataatccgccacctaagcttccgtgtaaactttgcagtccagc
tctgtcatttatgagagcattttcacaccacggtaagcttaagaaaacagttcaagggtc
aaggctggggtgaagcttgcagaaacctgctccagttggagacaggagccctgagcatca
gaggagagagttgcccctgcgaccattttcagcctacactgcacctccttgcatcctgaa
ctcctcagctaaggtctctaatagatggaaatctgagccacaaagaggcccctccttctc
tccgcacatctccgagtgatgacaaaagccccctcccccagatgacccctgtgaggggac
caatccggatacatccacaatacacaacacatcagagaaagaaagaaaaaagacaaatta
ggaaagaagacatacaaccctttgtgtgaggctaaagctcattgtggaacagtttaaagc
caaataaaaaaaaaaattttttttttttgagtaccctccccagaaactcaggcctgagaa
cggaggagggatttttcttttcatttttttcttcactgtcagatgagtaatttcagaaga
actgctgagtgctgaacaataagacattcaaggacccaaactggagagtcatttttcccc
cacaacaccctcgggtagctgttcgctgtctctggcagacaaaattattttccagccggc
tcctggaggaccatctataaacaaattaggaatttcaaagggtttgttttctgccttctg
gctgccagtaggggccggtccctttgtgtccttcatatgaaaaagtaatttaacaaagaa
aaaaaaggagagagggagagggagggagcctcggttcaaaaacagacaagcgtgtacacc
ctctctccctccctctgccttcctcttctgtccattgtcacgtttggtcagtgttctgtc
aaaacaacttttattatatgagggctctcagtccttcagggctccaggagcttggaagac
aagctgttttcctccagcaattccatcaataagaagaaaatgggaaatgagtactgattt
atggctgattcttcataacaaatagctccagtaagtaaatgctagccggttgtggggggc
gggggacagggaacgcatccattccccttccggctcagaaacagacccaagccgactcag
ctggggagcaggagatctttctaagtatttttacaacagcttgtcaagtcaggcacaaag
ccttacttcaagagaacgacaagaatcaaatctgcttcatgctaactcagagcaggagtt
gagcttgatatctgacactaccaactgcctcccttccccaccccccaatccccatccccc
gccgcgtcctccccaccccagcgttcttctcccccccccccccccacttccccatccgtg
cctagcagcctagctgcttgagagtgagtgccacatataaaagtaaaataataataattt
taaaaaaggcacacagcttggctcctagtctcctgctaaggacactgagacctaaggaac
cccgaggttcaggccatgatggtacagcacaggctccttgaagacaggaccagcaggcca
gagtcgctgccccctgtttcttgggatccagaggcagcatgtggagaatgagctgctttt
ctgagtcttggcacaaaaagcccattttctcattatcttagttttcattctctcggattg
atccggggcttggctggcagtcaagagctgcggaacaggaggctcgcaaatacagttatt
tctagcgtgctgatgctctccactaatcacggtttaagtggcatgccaaaactagccttt
gctttctagggccccattctgaggtttgcactttaaggtgaagaggttttaaaagccttc
ctaacacaatgcttttcgcttaaggaaattttttggctcaggaaaaccaatttgacgcta
ttgggagcatgccaacagaaaaaaaaaaaaagaggaaaaagaaagaaagaaaagaattac
tgtgtggccttcattcagatctgtttttttttaaacagacatttttatatacttttattt
tccagttctatgtctgtagagttgattgttcagggaagttgctagtagccacatcagtat
tgggtttaaataaagaatgaaaaatattctatgggaggaaaggcatcaacctaggtctac
agcaaatgcatgtggaactgtgggtcctcgttgtgggtgaaggataggatgcaatagggc
tctggagtgtgaaatgggagtgtgaaaaaaaaagtcatagcatcccagtgaagataaagc
taaaggccagcttctcttcctatcccaactatgcaatttcctgctcatgcagcctgctcc
actacctactagaaatgatctgtCTCCCTCTCAAACATGCCCT
Primer
(+)TGGTGGGGCCAGAAGTAAAA
(+)AGGGCATGTTTGAGAGGGAG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.