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Human element [ hs1533 ]


Position: chr6:19,719,222-19,722,910 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101928519 - ID4

Timepoints:
e11.5

Staining in eye region probably located behind the actual eye

Expression Pattern
eye (5 out of 7 embryos) 
forebrain (6 out of 7 embryos) 
midbrain (mesencephalon) (5 out of 7 embryos) 

Embryo 3


Embryo 5


Embryo 6


Fasta sequence
AGTTGCCAAGGCACAGAGATtctcttattatttctttactatttcctaatggctcttttg
gttttcaaggcacagaaagaattctcctgacagatgcttccactgggtgcaagtagccct
gctgcataaacttctcctatgcaacagctgatggagttgagtttcactgtgtccatagat
gtccaacaccatatttaggaatttcccagactctcattcttccccaaattcccacccaaa
ctgcacccctgtggaacagaagtgaaaattgactaagaatgttattcagaatcaaatggg
aaagtttccacagctccaggtaataaaagtaaaaagacagggtgatctttgaattcctct
ggagaaaaattaaaatgttctttattagttgctatagtgtccaaggaaagcctcctctca
cccttttttttttttaaataagggcttctccttcctacacagttcttttaatacaagtga
aaaattccaaattcctcatttgtttagcttgaaaatcccctgcacattcccacaaactac
ttccttttctctctttttagcaagactcccctctctttaatgaagagaagttcagagggt
ttttcccatgaatagatggcaggcacctgggagttatgaattttaaagtgatcattttct
ttcagccatgctggacaatgggcatctccttttgactcactttcacagctttgagaggct
ctcagatcagccacattccaatcggactggagtcagatcagagctgtgctggaccgcatc
aaggtctcgcacagaaagacaaggagcagatggccggcaccgagccctcctccccctttc
agcgtgcaaaggcaggcaatgtgggaaagcgttcgcccggcattgcctattgatccctga
atagaaccaccgcatgccaccagcctgtaggtatgaacctctgttaacagatggtgagat
cattatgagcaattaattcctttaatgtatcagtgggaacatgttggaaaagatgatgca
agcactgagtgaatagtgaacttctcactcctgggggagcacgcaggatctaccttgggg
ggtgctgggaatatcttcccaggctgcatctatatcccaggctggagacaggagctggga
actgactccacagaacagaggtgtggttttcattaactaattgtgaatccttgcctttct
tcatgattaatgccagatttgtctctaggtcatttttatgtatacataagaatcatccaa
aacacagaaacaaacaaaaacaatgttggtcagtaagtccaagatgcatggggaattgtt
tcacagaaatcagcaaagtatcaggtcatgggtcacatttgctaaacacaaatatggttg
tgacagttctaaattgaaaataaatgttgcttttgacaaagataaaagaatgataaaaat
atgcacagcccagcattggagtaaggaagacaatgtttggacgtgttataaattagtact
tttaaaagaggatttaaaaaaaaaatgaacccacatatataatgaattggagcaaatgac
acatgtagcaaattatttcccccagcataagctggaataatttttagatctcagtaacaa
tatgagaatgactatcagtggccaactgaaaaaacctggtaccctgttattcagaaatgg
ctctgagtactaatcagtgcaataacaatggcgtttttacatgtttcccgactttttttt
ttttaatatttcatagtggaggtgtttttctttcacaggaaaaagaaaaatcttctaaca
cagtatggatcattgggcagaagacagaaaatacagaaacaggaaatacaggcaactatt
cacttaattcatatttaaatgacactttctgcttgtaattaagacactcaagtagtgtct
ctgttcatgaaatttacataactgtacaatagcttgcctaaatgaacagcaaatggcagt
taactttgaagtgtattatcttaattgaataaatctggctttaattcaataaattaaaaa
catagaaaaaatatcgcaaagacttttaaaaacagacttgccaccccccataaatacagc
atggtactgtttatagctgtgttggaatgctcggacattttccagtatgattttagaact
ctaaaagcattccggtacacactcactgtttttccatcattgtttccaaagcaaatcaat
gtcactttctggaaatcattgataagaatatctgaacacgaaatcaaaacacataagctt
gcttatatgagatggttcctcatctgggcttccaatttctccatctccatgggaaatctg
gtctttctctttttcaattctgtatcactgagtgtcctatgacatagagaaaagactaaa
tagaggaaaatcgttttcttgcataggaaatacacgttcccatcacttttccatttaaat
cagatttacatggatcataaatcccttcagcataggagaactgacagaagatgctaaatt
ctcccctcccaaagtttgttgctttaatcagcaccatcgtgtttcagtgattatatagtt
aaggagaagaaatcatgcaatatgtttttatttgcatgaaataagttaattaggcaccac
ctgtgccttgtatcagtcaactaggggaaaaaaaaggcaggagaacacaggtgttctaag
agcatcatagtagattttatacattaacttaaaaattctaaaacctaaaatcacttatca
gaatccagcagcgcatattgctaaggaataacccatgcacgattgcgcacgcacacacag
acacacacacacacacacacacacgcacacacacacagatataaataaaaatcgctgtga
agaaattcctggtttcttggctagcaagaaaaaaaaggtcgtaattcattctttcctcgt
tctcacagtgttcactattgtaccatctgcaatatacaatgtacatgctcagccataacc
catacggctggaaaagaagcattcacactgtgaattaccatttttcccagcatctagctc
tagtcaaagacagcacaataataaactagaagctcctttgtctgttaaacattgttcttc
attactacatgaaaagcaaattgtctttgtatagaggaagagtggcacacacggccatgg
gagtgggggaagggatttgtctctctcactgaccacctcacagccacggcggccattctt
ctttctccacttgcccacccaactatgccttggaaattacttcatctgcaagcccattgg
ggatagatcccttgctccattgagtgagatgttggattagagactcatggtatgctttta
cactgaatgtcctgacacttacatccacagatacatatttttaaaatcaatttggtctgt
cactttttacttttttatgagaagtgaagcttatcccagacattctttttttctgggcta
aatatactcagcaagttattgtgggttgtttgggctcctaagagccaagtgaaaagcaag
cgaggaagaaaaccaagaaaatatttggagcagcagatatagataaaaatgtaaacatat
agctatagcacatagtaatgcttactatgaaagttaagaaaatgtatacattagaccaga
actaactcaTCCAATGAAAGGGTCCTTGT
Primer
(+)agttgccaaggcacagagat
(+)acaaggaccctttcattgga


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