Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1527 ]


Position: chr2:8,781,394-8,783,591 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101929567 - LOC100506299

Timepoints:
e11.5

Staining in forebrain/midbrain boundary region.

Expression Pattern
forebrain (7 out of 10 embryos) 
hindbrain (rhombencephalon) (7 out of 10 embryos) 
midbrain (mesencephalon) (7 out of 10 embryos) 
neural tube (7 out of 10 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 6

Fasta sequence
ATGTTTTTGCCCCTTCCTCTcttagacataaaaatctctttctactctcacagttttaaa
ttaggaatatttggtggtgtgatcgtgtatgtttaaagccaaacagaaatttcctgtttc
ccagcacaaaataaaattcaagtttataaaagagcctgtaaaatctcataatcaagccca
ttagccaggcaaaatgctccactttgattttgtggtgtttagctttcttttcttagcacc
acttcattagcgcgcttttaatggatgttctccagcctgcttcttgaaattgctgaaaaa
gaaaacacacgattctaaagctcaagacacaagagaaatattccttcccccttaaatatg
gaggccgggagaccgcagagcgtagggagacacatgggatctagcatggccccaccacca
ggtcttccgggcgcgtcggaatcctcggccgcatttttgctcactggcctcattgccagt
gggctaattttcagctctttgctgcttcagcggaccagattttcttgattaataacaaaa
ggttttgttgggatcagagctgtttcccaccatctctatgcaaaccccggcaacacaaac
tgtgtacattaacatttcaaggcgcttcctattaaggatggcaagaaaagcctctcttgg
tgggtaaaatccattttgtcctctcttgtgacatctgttctaacttttaaagcagaaagg
aagctagataatgccagagagtcctttgatttacagtacttgcccttcggacgccaccct
gctctctgaaagcacctaacctttcttttctggatgtacgcaggcaccgacgtgagaatc
tgcacattcccttcacactggagaacttcagaagtaattctgaacttgtctttcaaactt
ttaattgtctttttcatgatttcttaattacattttcaattacttctaaacctcacaaca
ctgagtctttgaaactccaatttttaacagcacaaaattttaatgtttattgctacatat
gttattgtgtttcatctctaattcccctcaaagctaattttgctttagtagaatgagaaa
ttgcagcaaatttagttaggcaactgaaatatgtacacaaatacagaggaacccccgcaa
gtgatagaataaaaaggagaagaagagaagcccagcggagtcccggtcccctcctaccat
ctgtgctgcaagctctggggtcccttacattggtcatcctgaaacaaagctgaaggcaga
ttccagccggttttccattcactattcattcagaggtccacccgctccatatgcattcag
ccaactgctgtgttaaatcagggccttctcccagaattgacatggtaatgaaatcatggt
gttgctcagtgaaaagaccgccataggtatgcccctctcttgacaaatccaccctttcac
cccattgaggcctgaaaattatctcataacatcacaacatctgtgcacagaggcctgcct
tttggagctgggcatgtttattgctcggttgagtctcctgcactggctctctcaggatag
ggcaggctgccactcagcttggtccagccactcctgggcattagcctagcagccccaggc
ttccctcctgcttttcccacagcctgcgtgctcccaaagcctcggggcccagaaatgctg
acgtctggatgccgcatgccaggaattttagtgggatcattttcaggtgttaaaggtgga
ctacagagctcaactagttcatgtatacttgctgtcagaaaaccttataattagtccggc
aaagaaaaccagacaaaaagtgtgaggtttctggggtgggaggagctgaaagtgaggaga
agttagctaatgaattttggtcagactctagcaaatgacatttgcttaactaataagtgt
atatgaactttatttaactggcctaggtcaataaaatgcttctacagggagcagcgaggt
tgggggaacatatagtttgcacaatctgcaagctatatgtgttctgccccgatacaatga
ttccatttcatttgatttgacatttaagagccctttttagaaggaaaatgaatatttctg
tattttatttgctataacctcacttgactctgcacatagctgagaataaatgtcacattc
attgcactgcaaacagttGTGTGCTATCCTGGAGAGGG
Primer
(+)atgtttttgccccttcctct
(+)ccctctccaggatagcacac


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.