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Mouse element [ mm1521 ]


Position: chr12:112,400,165-112,401,988 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Rcor1 - Traf3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGAGGGAAATCAAAGGCCGGtccataacctgcagggcctggcatccttggctcctcctct
cctctcctctcccctggagttgcccccactcctggctgtagtcacactggcctccctgag
tgctcactgacctcaaggcctttgcttttcatgccgcagtccacatggtaccttgcccct
tttccttccggtccatattctgcctcctaatctgcctttcccctgacccttgctcaggct
tcctctcccttgccttccctcggtccctcagtttcccttgctatagatcaacctgtggtt
gatttatttccgtttctacccactagatggtaagctcaacggaacgggaacatccttggc
tttgtgctagcaggactgaagggatgccaagccgctcactgcttgctccctcggcaagca
ggtctgggcagacgtttggaagaggaggtgggcgagggttcttccctctgcatccatgtg
gcgttcaagctttaaagatgagggagcatgccatttcccagtgttttcaggaagatagga
tgtcgcattgcctaggattagaatgattcttactatttctagacactcccccccaccccc
acccccgggatggagtagctccacccaccttgcttccttggctgctgctgtgtgggagga
gctctgccgtctactggactattccagcagccattggcttttgtttgctaagggttcggg
aaaatcaaaggaaccagcctgtgggtcggggaggggactaaccagcatcgagggaaagat
ggcctctgggatcagaccgaaggcatagatagatcaatccgtgttgccctttgtctcctg
gggtttgctgtgtggggcttgcaaataatgcccctgcttcccgtgacattcactgaagag
ccctttttcttggaagagctgtggagtgggatgtatcttcaggaaacgttaaagataggg
gctgagtcaaaactaccaggtggagaaagaccacgtcaggactctctttcccttgtacaa
tttcaggcaagtgtttgagaaagcacagatggtatgtgcatgtgtgcacatgtgcacaca
agaatcctgggatgaatcccttaaaatgagaacacttttgtttcctgattggcctacaga
gatgagaaaaaaaaaaaaaaaaaaaaaggaaaggaactgtgtatgtggcccatttccaac
ctcctatgtcccccattccccactgccctccatctcctcagcatgatatagacctgggaa
tgtgctctgtcacccttaggcctctctgtgtctcctgtgtgaactgtcctgacctgtagc
ccacttctttgatagtgtgactcttctgtgcaggagtccactgagggacaggactgggca
ggaacgggacgcagtgtcacctcaaagctgggacccttctaccatcatcagcatctttta
gtcaaaagatgttgtattggacttgtggccacgaatctccagtaagtttagacatcatga
tcagcatttaaaaaataaaaataaaaatagataaaaataaaattgggagctgagctggct
tagtggtgaaggcactcgattccgatccttttgacttgaatttgattgccaggtcttaca
tggtagaagaaaaggatagactcttgtgaattgttctttaacttccacaagtgtgcccca
cctcaaataaaaataactaaaagtataataaaaataagtaatagaagctacatagtgagc
gtgaggccagccttggttacagaagacagagagagagagagagagagagagagagagaga
gagaACTCCAGAGAGACCCAAGCT
Primer
(+)agagggaaatcaaaggccgg
(+)agcttgggtctctctggagt


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