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Mouse element [ mm1519 ]


Position: chr7:53,707,677-53,710,875 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Sergef(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGGTAGATGGGGCTGGGTAAgtcatggtctctcatggtctctgttctagcacctgaagac
agaacgaatcagcttcagtggccccaagtgactctccagctctgctgagctctgtctcct
gaaaacagtgtgctattgccatactcaggcgtgcatcctcagcccagcggcacatgcagc
catgttgacttagagatggctcctgggaaaatgcccctcacctgtcactcaaaatgtcag
accctccaggcaccatcagccccagcacacacttgaagcaggatggtagcacacgagcac
ctccaggagaatggctgccagcttgtaagtgatggggcatcatgatccaatacaagatgc
tctgaggctaagctcacatgctttatctcactgggatcatttgaaaagagctacacatac
caaagccttccttcctggggaggaccaacagaggtatgatcagaagatgagaacaaggcc
ttctccagactccctactgtgtgggttaagacaggaagtgccctgtgataaagatgcaga
gactttatccactgaataagccattcttgctgctgacagtttcagggcctattcacttca
agagagcgaacggaaatcctttgctgatcataaagttaggttttagggactatgaatgcc
ggctgttcccacagggaggaaaggagctacgttccttcacggaggtccacggttgacatc
ctaggccatggagcatctaacaaagggaccagactttactgggcaagccgagcttcagga
cagactcagcctgacagggccccagccctgcacgcagtgtcgatgctacgaacaccagac
aggagtgtgtagccaccaatgtggatgactcctttccatcacaagagcatccagccaggc
aaagatatccacctgatagcaactccacataaagtgctatttcagtgcctcgtatgagca
aaggagaaaggtgtagaggggaatgagtctcgtttttaaggaaagtaactaacgcttaat
gatactccacactagacttctgctctgacatctcactaccctaagaacctagggtaagga
tgtccgatctgagttcatttcaccctgaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aaggtggggcttagttgaggcttaggctcacctccaagcagtgggaaagccaggaaacaa
tcgaggctcagcctgcctggatcctgagttcttaacctgtgtctcacggcttctggatcc
ctgcctgacctagactaagcattttctctctgcatccccacagaggaagagtagagcttc
aaggaagctagggagcgctggagtgataacatacaacagggaacagagacaggaggggag
gaacgcccactcaaaggaaggcatgtgtgtccagaagctcaggtggggaaggcatcagaa
tataacaatgaagatacaatgaaggtaaggtcagggtttgtcaggcagagctaaagtggc
aggtttcaacagggcaaaagtgaccatgccttctccatcagtgtctgtcctgccacctag
ccaaactgtcagcattgtgcacatgctccacaaccagcctttgtttgttctgtgtcctca
atctcttctgacctggcagctttgccctctgcccccagactggagtagacaggctgactt
gaagagccacttcctttgagaccctggcccctccagtgaatggtgccctgccttcatagc
ttgttctctcgggagaaggagccgtggcccttttccacatgaatcgcttacagcagcaga
tgccacaaggttgcctggagagtctggaaatgccatgttgccatggtaacagcagaccaa
ggttggggatgctttatccctgatgggctgccctgccctgccatgctgctggtgaaatct
tccaccatgaataagaacagaacaaatctattcatggacaaggagatgccggacatcttt
gaggaggttcagttccagcatgcactctgggggctactcacccaattccctggctgatca
agagggccaggctctggctggctctgcttcggctcatgtggcctaatagagtttttaact
ggctcagccaacaaagcaggccttcccccactccagcccccaaattaccacttctcttat
ttgatgccgccaactggggatctgccggtgtggaccctggcaattagcacagcacccgca
tttgttgggaaattaagagccactgattagcctaattctacgccatttacaggcagtgag
tgtcaggctgagatcggcttttccaaatggtggcccggagggtggcatgttcacagcgtg
agtttgaaatggaatcaagggcctggggagccagactgcaaagaagtagaggcagatcct
tcacctcctgtcaccactgtcctgtggctggttctctgctactttgtggattcttctttt
tcccaccctttgtccctcccagatttacccctatcactggataagagagaaaggataggg
ggaaagagatagaactttgagtctaacttctttcttcatgtcctttctttacttgtagct
gctggtctttgctaattcgtgtgttctttttcccactctttattcctcccctccctgagg
agggggagatagagagaggtagaaagatctgaatccaatttcttcttttcctttgagcat
gactactaacaaaccacaattaatccccccgccaaatgaccaacaaccactgaccccgcc
tctcagggccctagcatttatattcatttactctctgaaaaaaatccctgaattccagat
gtcacacagatgcagaaatgatctgcagctggcaaagtcgcacctctgttagagcttgag
gcaaatcatagtcatctgctgcagtcagtccaaagcagccccatttccccacacctggca
tgaaaacaaaaacacattcttgtgttttaaaggaaaccaaagttccagaattctcccttc
atggtctcccctaactctgctcactgaagaatggaagatcagaagaagatgtttctagag
tgaggttacactcccaaatcatactgacccagaaagggaacctatttccctatgagacaC
TCCAGGCTGAGTTCTGCTC
Primer
(+)tggtagatggggctgggtaa
(+)gagcagaactcagcctggag


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