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Human element [ hs1519 ]


Position: chr9:22,087,552-22,089,798 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: CDKN2B - DMRTA1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCCTAGTGGAAATTTCTATTGCTGattataatatttgtcctaaataaattgaatagactg
tcaatcttttgaaaataaaagcatgacttgattagcaattgtttagtctgatgttttcct
aatttctgtcatttgcataccacttctttgattttgtcatatccttgtatcatctgcact
aatagaaatatttttccttaagttgtctctcctttaaaaaattatatccatttattttga
agagaaactttttcactaactataaattgaaaaccgatatcatttgccttaaatagaaga
ttgtcataaaaagaaatgccatgagtgaaataatgttattaaatatttgccagatatagt
ttcctatgaagactctgagcttgtggcttgctgtctctgttgaaaggagagactagggag
tgttatagaagtggtaaaataatccttccactgactgagactatttccttgccacaatca
gaagaactaaaagaaaggaggatatctgttaatatatgaatttatctaaatgtcatgcag
tgacttctaaaatcatctggtgtgctctgtttccccttggaggtgacttaggcctggcat
cccaaacaatacatactggagtgaagctccaggaaaccctgaggagaagagaagggctta
aagagcaatcagccttcgattgctgggattatgaaaggtcgtaagaagcgaatgttgcaa
tgttttattatacttgatattgaagcaaggacaagtaataatttattattctctccatgt
cagtggtatttacctttttggaatcatgtgccccattgagaatttctggaaaaccatggt
tcttctactcaggagaatgcacaattgcacacatacacaaatgtgcaagcacacacacac
acacacacacacacagaattgccacagaaggtcagtaggttcacaggccctaggctaaga
accagcattctgtatattttacatgtgttctcttacaagttaccgtgtgattcagttcac
tccaaactgcggttaagtgcaaaacatggttttgaatatttctatcaattagtaagagtg
gtatgttaatttaaatacaccaaagtggagaattactgtcctctcaatagctactttaaa
tagacataagttacagtgatattgccttccaggaggcttcaagaaatgagatcaggctct
ataaaagaaaatcacccaaccctataaagtcatctttatgaactttgaaacaccactgta
tgtacctagtaaaaattattcctgggtaagcagactcccaggcctgggtggagttcacat
gagtccctttgctaaaataaacagaagtgactgggaactttggattgcctttgtctgaac
ttgagtgtctggatggatcagcatcagcagcataccacacacctgcttgtccagccaaag
agaaacccaaagacttggcatttgttttttacattgtcaactgtgcaaaaatatcacgat
tctaatttatgagggtccatgagttttaaaaacaccccctgacatttttctagccaaata
atttttcctttaaaaggcacaggatgagcaacaagattaggtagatcacttcaatctcta
atttcaaaagataatagttaaaaattcaactgtaggactaacacattaactatgtaataa
gacccagaatagtctttggagcaaatttcagtggatacttgatcaaaataatgttgaaga
caaaatcttgaattgatgatatttatctgatacaattatttacataacaaatgttaaaag
aattagaaaaatttcataggtaagatgttcattatcttcaagtgaagttacttgctttat
attaagaaccacaaaaacttactaaacttttttttttaaaagggtctcactctgtcaccc
aggctggaccggagtggctcaatcacagctcactgcagccttgatctacccagattcaag
tgatcttcccacctctgcctcccaagtaactgggactataggcacatgccaccatgcctg
gctaatatctctcttttctttttttttccccttattttgtagggacaagttttctccatg
ttgctgaggctggtcttgaactcctgggctcaagtgatcctcctacctcagcctcccaaa
gtgctggagttataggcatgagctactttgccccctagcagacgtcttactttttttttt
aatTTGGTATTAGATTGAGCCAATGAC
Primer
(+)gcctagtggaaatttctattgctg
(+)gtcattggctcaatctaataccaa


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