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Mouse element [ mm1516 ]


Position: chr6:89,191,339-89,193,913 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gm839 - Plxna1

Timepoints:
e11.5

Reproducible staining in facial mesenchyme in 8/11 embryos. Staining is located just below the diencephalon, possibly extending into part of the diencephalon.

Expression Pattern
facial mesenchyme (8 out of 11 embryos) 
midbrain (mesencephalon) (5 out of 11 embryos) 

Embryo 2

Embryo 3

Embryo 4

Embryo 5

Embryo 6

Embryo 7

Embryo 8

Fasta sequence
GAGAGAGCAGAGCCCATTGGcattaggttgtttccatagcagcaagagttaaggcactcc
aatgaaagatggggaaagtgagcatgaagggtagtcaggagctcacaagtcctccaatgg
taagaaatttagcggttttatgtgggcatagtatacattattttttttttttttttagtt
ttagtgaatcatatgagtgtcttagttacccttctactgctgtgataagacaccatgacc
atggcaacttatagaaggagcgtttattaggtgttggcttatagttttaaaggatgagtc
catggtagggcacataggagcaagcaggcagatgtgagatgtggcactggagtagctgac
acatctccaaaaagccacacctcccaatccctttcaaacagttccaccaactgggaacca
agcattcaagtacatgaatctataggagacattctcatacaaaacaaaacaaaacaaaac
aacccacatacgagttagggttgtaaagactcgtttttatatctatggagcctctgctct
gagcctggcacctcactcaccctgagaaactcggggtataaaactaatagagaagcatgc
tccgagggataagccaacagccacagagctagggaggggcgggctgaagcttggcctgaa
atcctgcatgtcccagaattcccagataataaggagatatcttacacaacaagtgggcca
gcagcccccacccaggagctggatcccatctgtctggtccccattactcttcaggccatg
agtagtatgtgggtgtgtaagggcaggtctagccatctgaaccttgttgtgtgaatggcc
agcctggtcctaatggcctgtgtgctgaccccacccaacctgcagtgagctccctcccct
catctcctcccacacctgccatcagcctggaaatgattgctgtaattacagccttgtctt
cccaaggtcttgtttgcagaagaccattctctccagggaacagggaatagctacagtacc
ctcccttcttatgctccaaggccaccaggaggtgcactgccgggcttgggaaaggttctc
gggaaggtaaagggcacgtttgaaagttcaaaacatgcagagggtcagaaactgcagggt
tagctagtgactgatgcccctggagactgcaatatcagcattttcagcacggctgggtgg
acagctccacacctctcccctcccccatccccaggctgcgccctgctcccagcctgggct
gaggctggctcaagagaaggagctagatactccatcaagaccaatccaagatagagacta
ccccagccagggtacaatctatcccctggtgatcccggatctgtccacctgtcacaaagc
agaatttccctcaggatagagacctgccctcatattttctttagccagctgctgcagcct
ctctacatcccacccagcccctccccctcccccagttcagtcttcccttttaaggcatta
agtacagagatattaaaagggattgttcgggccggttaattagcttggaagaggcctctg
cagtggcctgggtcacagacgtccacctctctttattagctgaattgatggagacagcag
ggcccagatgggaataaattgaatccgatggagaagaggcttttgcacgcgctattaaca
ggaaaaaagagtgggcctcacacctcactcccctctacactctcctaccaccgcacgctt
gcagatgtctactcaggggcgttcctccgaatgaacatcaggtcctaagagattcccagg
gacccatgccacagggcagcaggaaacatcagcccaagggacgaggagtgcctcaatcag
ccagtgctcagggtccgactccagttaaggcaccagacaacctgaagtccagggacacag
cacctgttccctgagcacaccatcagttcctttgtgtcttctcagcatcatgctctggaa
aactctgtccccacaattggggctctcaggtggcaaaagacttgtccatgttgcagagcc
aggaagggccaagcaagacacttaccagcagccactgtccatgctgtgggctataggtga
tggattgcccctcatgcagcagcctgttgggtggtcactgctgccatacaagctgcaaga
agaaaacggctcacagtagctctgaaacttgactggaatcctcagcaggtgaggcagcta
gcaggacacaatatctgagtccatcattttagctccggacaaggcctgaactggtcggag
tgagccagaattagtctaggatggagctcagcatagtaagtcacacccacagatggcagg
cactcaccccaactcttctgcagccacattcactcctttcgggttcctgtctcagtactg
cctcctggtcactcaattctatatcctcttcagaggtacccttgaggtcgaatccctgtt
gactcaatcctcatctcccttggggacagtcttgttcacagaccattggcctctggctgc
aggagaccctgattgactgtaagccagcctgtgtgGCAGGGACCCTTGTCACAAT
Primer
(+)gagagagcagagcccattgg
(+)attgtgacaagggtccctgc


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