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Human element [ hs1513 ]


Position: chr5:14,444,355-14,446,026 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TRIO(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGATGAACAGTACTGCCTCAAATtaaagctgtcagtacatggaatattcagtttcacatg
aataaacaaaaaccacagaagtacttgtcacaatgttggattgtttcgactgtgaagact
gattgtgtcacacaagttgctgtgcaaactaaattctatctcaaatcgttttttgccctt
taagtatctttaagtgaatggtttaagacaggatgtgcagtataggatagtgggaatggt
gtgttgctgtagaagccagtttgtccctgctcacccctacctgtgtgatcttataagttc
ttgataatctcgctgagctgcagtttcctcatgtgtttaaaacaaacaaacaaaagaaga
tagagaatgctcgctattatggttattatgctctccaaaatctacattgaaggttctatt
tcattttaagcaaactgcattttaaaaataattttgttcccttgcttccatgttaaacac
gaaaaaagagtgttacacattgaatttgtatatatttttagccaagaagcaaagaaactt
gaagttatttggtattatagccttttttagagtgaatataaaatcttgaaatattagaat
gtttttgaagttaatattaaaattagactgaaacctcccccaaaaagtgcccaagaaacc
cacaggtcccaggttaggagccttcaggcaaagtggcttttcctagttttggaattcttt
tcttatttctagacaaggagcaggcaccctcctcgtttaactgtaatctgtctttggtat
gtgctctttctaagtatatctcttcactagattttgggggaacacaaatttatagttttt
cattctgaaaaatttcctccaggtgctcaaagttggcctcagggacacgtgagcaagtcc
ataaacagagtgagtcggcctgggagctgggtaacaagccatggaattcatccatggagt
cttcctcatttcctcttcctgtctccaaggagtggcagtgggggctgggcagccataaag
atgctcctattaattttttgcaattctcatataaaaccatacaaatatgagcaaaccaca
taccccccgccaaatatctagtttctctgaaactatatgtgctaagtggaaaactcccag
acagagcgagcagcagaagggaacatagcacccttaggcagccactaatcacgttggaca
catcttctagtctgtttatatgtaaaatgatgcttcttttgttgatacttttaatatttg
actataagaaaccatctcaatcatatccattgtccagtttctcagatgcgcagttgagaa
accttgctattgctacttcttgttaaaatcaacaattccttctgtagtgaaatggacctg
tacctatcagcatgagaagactagaattattcttctgtctaaggatacagcctttgaaaa
acttctgagacaaaatatattagccctaaggcaacttccccttcctcttttatccttgaa
agctgatggattatggtaagaagtggcccaagggcacagaagcaggcgtgcagttgagta
aggaactcttccataataaaaaggggatgtgcttattatgacataggaactgaacatgga
atgtttttccctttgtctctctccagttaaaaAGAAAGACAGCACAGTGCCC
Primer
(+)GGATGAACAGTACTGCCTCAAAT
(+)GGGCACTGTGCTGTCTTTCT


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