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Mouse element [ mm1512 ]


Position: chr12:16,861,731-16,864,043 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: E2f6 - Rock2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTGCTGGTGGACACTGGAAGtgtatctcatttaatcactgtgagaaccttaagagataca
cactattgttaacccaaccttgcttctgaaggaactgaattagggagagccagtttgccc
catctccatagcagcatgtcctaagtcaggacttgaacccagacagtctggttttatcag
gcatatccttaactgtcccatcattctattggagtagactacaggtggtcttagaattct
tgcctgcatctcccagaaaaaaggtctaggggctggagatgtaggaatggggtttttgtc
ttgtatgtgtaaggctctggattctattaaaaaaaaacaaaaacaggcatggtggcaccg
actataatcctagcactccagaaacaaaggcagggggaccagaagttacttcaaggccat
ccttgactacatgatgagttcaaggccaacttgggttccatgaggccctgtctaaaataa
taagaaatagattgctgggcgatggtggcacatgcctttaattccagcacttgggaggca
gagagaggcagatttctgagttctaggccagcctggtgtacaaagtgagttccaggacaa
ccagggctatacagagaaatcctgtctcgaaatccccctccccccccccaaaaaaaaaag
aaagaaagaaagaaagagagagagagagagagagagagagaaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaatagacagat
tgaacctaatgctttcttcacaaactgcagtaactgggacatctggaggcttgaaagcca
ctaatgcagcccattcaaagtacaggacttttaaggggatgaggcagggataacccattg
tcatcttggccagatggacacagtgttagataaaaaagaagacctgcctggtgcaccttc
agcattttcaagacactggcatctggggatttcccttggtgtagacaatagctgacttta
ggaataaattctgaaaataattccacctgcattcccggggacatcctgcctttgacaacg
tacttctgtgcagccccctgaacacggccgcattcatgctctgctcagtgggaatttcca
acaccagggcctagaagctccacctcctcccactcaaggactgggcttccaggttggctg
tttccatggtgaaggtgagaagaagagagaggttggatcatttccatggcaactacgcag
gagtggtggtttccttggcaacagtgggaaggtagaagcagctgggctcaaaagatccct
cccccatctcggctcttccaccacaaagaccacatggcaataaagacacatgctcctaag
gatagaagtgttccgtctgggctctggaatcagaaagactgtttggaatacattatttca
ttatttgttttctcatttatgaaatgggcccaataatagaagcagttgaattgggtaata
agaagcatcaacacaaacttgggtatgtgtgagccaaggtaaagccttgttattgtgaag
tacctaaggactaccacatagcaattactggttttgctcaaatgcagaggggagcaaatc
agattttatgaagccattcaagaaacaaggaggctgggagtcaggaatcaagtgagtctt
cctgagtctcgctggtcaggagctggtattgtggctgaaagccaagcactgggactaaca
atccactgttcttcttcttctcctcctcctcctcttcattttcttcttaaattttaattt
aattttatgtgtatgaatgttttgccttcatatatgtctatataccacatgcatgccaag
tctgtaccgaaagatgccaagagagggtgtaagatcccctggaactggggttatagaaag
ttgtgagccaccatgtaggtgctgagaatctaatctgggacctctggagaacagccagtg
ctcttacccactgaaccatctctcctggctctcaatgttcttcttgcaacctatgatctt
cacaatgtggtctctctgacctgaatgggtccctttgtttctgtacctcaactagaaacc
ccaaagcagaccttctatatctgctccttcacatcactctaagcctcgagtccacagtgg
aggctatgcaataagtacaataaggaaggagagaatttatccagtgatgtctcccaaccc
atcaactgctggttatcagtttagactacagtttgggctgccaggagattatcagattct
ctgttgtgttcctGAATGACTTTGCCACCGTGG
Primer
(+)gtgctggtggacactggaag
(+)ccacggtggcaaagtcattc


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