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Mouse element [ mm1510 ]


Position: chr16:33,593,553-33,596,151 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Slc12a8(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCATCTACAGTCCCAGCGAGgccacgaggaggtgggagtggagatgaaagaatctcctga
aggttcaaggcagctagcctgttttatgcagagaccttgtctcagacaaggcagaaaggt
gagggctgacattccaaggttgtcctctgtctgcctgccacgtgtaccatggtacatgct
tacctacacttgcagggtacatgctcacccacaccccatggtacgtgctcacccccaccc
ccgaacaaatatctacccccaacatgtacatatgctcacacaaacaccgatttattttct
gtgctttaagaaaatgtcattttgtaaccgtctaggagttaaaattataatactgaatag
agagtcagctacatgggcttctccatcttagagaccaggcaggcctcctgcttctcacag
cagcgtgagaacctttgatgtgaggggttttgtttgtttttttttgtttgttttttgttt
ttttgtttttttggttttttgttttttgttttttcccaactggggaaggaggggctcaga
aaatattgggaaggacctgactgacatcatacagacaattcggaagcagaggaggacctc
ccattgctttggagtggagcctcccctgactctgtttactggggggggggggggggggat
ggataaacacagaggcaggccacatgattcaaaccacttgttttcccctggcagatgttc
ggttaagtgatgaaaagcatgcatgattggcagtttccatggtgataggtttgctaggga
ttatctgtgcatgagtcatggctggggcgccctcctgcactatcctcttcctggctggaa
aggggagctttgaagaataagcattgttgccttgtccccgcctctagagccgcatcctat
atattacctagatactttatcccagggggcagtgacttctgaggagcagttgaactgtag
gtgtggtgcccccactgtatttatggaacctgacctctggtcctcaccaagctaggctct
accacaccctgtggtaggggctgcaggggtgaggataggggttggcctagactcttcatt
tgctttgctgtaccagcaaaacatccctctctacagggttttcccaaacacacccttagg
gagccagcccctccaggaccacagttcaaagagcttgctgagaaaaataccagttgtatg
aggtcacataacccttgtcctcaaatcccagactcttactggaaaggacaagaggctctt
tggccacagtcagcactcggagctgtggctgaccacacccagcgtaaagaacttggtggg
aaaccaacagcttttaccagaatggccttggccatcttctttgtcaaggtctgtctctgt
ggtgcccttgactcttgatcatgacttcttatttacacctatgcatcctgggaagctgtc
tgcaggacctcagcccggattgctctgtggttaatgtctcactgactcccctccctgccg
acccgaccgaccatccagccccacactatttctccatctccatgaatgagaacaagcaag
cccctgctggatgagagaagggaccctaggtttaaaaactagagaggaccaaaaaaggat
ggggcagatcgcacttcattctgacggacttgtgggcaggaaaaggagaagagaggaagc
tctatgattgtacacacttggttaagattttatagaatttgtgattttacattatatcta
taattgttatttccatagcttaccatatgacacaccgcacagagctgtggatgataccgc
ctctcttttaaaccctccctggttctgtgagaaacaggtctgttatcttagtccatttcc
tatctctatcacacaatgcctgagactgagtagaagtttatttgactcatgattctagag
tctggaaagttcaaggacatagtgtccaacatctgcacagcatctgggaaaggccttgtg
atgtgtgagaacaggctggagggtgtcacatggtgaaacatagcaaaccatgctaactca
gatttctccactcctcccctcttgttataatcctgcctctatcttccgggtgttggaatt
acaggcgcatacccctgggctggcagttggactttgctatagttgttattgttttatgat
acagatagtagagccgagggctttgtacatgttaagtaagtcttactttaccactggcca
cacgtacctagccctcttttcttataaagacactaaagtcaccatgtggtctcattctta
tgacttcatcttatcctaattacctcttaaatgttccatcttcaaatgcccttaacataa
cctctctctcccaggaagcccaggttagcctgatgtaagagatcgatatcagctcaggaa
ctccaagaccaagttctcagcacaaagatttatttgccccagagagacagagggaaggga
ataagagacaaagacaggaaatagaggacaagggagaagagggatggaacaggggagagg
atcagagtatttattctgtggggacaagactgtctctggatagaggggagacagacatgG
TCCATAGGCAAGTGGCAGT
Primer
(+)gcatctacagtcccagcgag
(+)actgccacttgcctatggac


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