Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1509 ]


Position: chr9:62,905,817-62,908,296 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Pias1 - Skor1

Timepoints:
e11.5

Expression Pattern
forebrain (4 out of 4 embryos) 
midbrain (mesencephalon) (4 out of 4 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Fasta sequence
GAGGGTTACTTTCCGTGGCAcacacgtggaggtcagaggacagctttgaactatctcttc
tctccttccaccaggcaggttccagggattagactcagaccatccatgtttggtggcaag
cacctttaatccactaagccatcccacaggcctcacttttatggtctaatattagtctgt
tagacattactcgttggttattttaaaaattacaatctgaagtgttccgtacaaggaaaa
aatgttaaaaggaagtggccaccggctgtgtctagagctatgtttatggatgatcttatt
gtttttcctttcattttctgttcttcatgttttctgagttgactctctcttactttataa
ttagccatgtaaaatgagaaaaaataatgaggttttaaaaactgactgtcaaatagtctt
gaaaagccagtgtgcttgcccccttctcccaaggaggccctgacatttagaaacaattta
aaaaaaaaaaaaaaaaacagactggagcaccatttaatcctattactcttctggacctct
tgcaaactaggggatgatccctttgcctcttcaaaataaatccccccaaggtcatgcgtg
tccccccttcctacccccaccccccatagtaacagagggatgagattcccaggcctgtgc
tccgcccctgcgccatctggcacccctgaatttgatctaagagtcacggctggagccagc
caaatattcagctgctcagtagaagatatttctccctttatggacacccctcctagcaaa
ccgctgtgtcgatccaggactcagtttcctttgcaaaaggagtaatgctgccctagctgt
ggaagttcctggatcagttagttagcttgttcgcctccgtctagggccctgcttcccctg
ctctggggcgcccactggaaggcccgtggactgccatgaattcatttgcggggtactcaa
agaagcaagcaaggcttcttttccccccagatgacttttcacacactgcagaggaggtga
gtggctcccgatgtttgctttccatataggggttctggataagatttcctttgaaacaag
catctgaaaaccacgcaggccaggagactttccctagtcccttcccagagtggacattat
ttctgaggggaggcggaaccctgaggacggagctgaaagaatggataagaattcttctgt
gttggcactcccgccccactctccctggaggctgagctgctgggatcaaagcggctgaag
tgggtgccactccactgaattaagatctgagatgccggataaacccagcctgcacttctg
ggtcctcctcccacctcctgtcacctaggcaaccgggaggagcctaggagcctgttcctt
cctccctgcccctcgctacccactcagacgcccaggcccacggttcttccctaggactca
gcccacagctcctctgaatctcagcttctggagagttccatcctctcaactcctttttgt
gcacacagaaattagattccaagcagaggggccccaacccgttaaaacgatcccccgttt
gcatgaagaatttgcctgtcttcctggcagaggagctacaggcagagtttgacctccaag
gaacagcatgtccaggcatctactgcgagggcagaggacagtcagggagcattgggttgc
agagtctcctagaataccccacccagctagcaaccagagcagaaggcagcaggttgccag
atgagggagaggagctgagaccagggccagaagatcctggagttcattttctgtagaatc
tgggagttaaagacttattttatttttaaatgtgtgtgtgagtgttgtgtgtgtgtgtat
gagagagagagagagagagagagagagagagagagagagagagacagacagacagacaga
cagacagacagacagaaagctggaagaggttttagatttggatacctagagctagagctc
caggcaaccgtgaaacacttaatgtgggttctctgcaagaaccatactgatgcctaacca
ttgagccatctctccagcgctgatttttctgagaggaaggtttccatgacctccaactca
ttagatagctaaggatgacttaaacttcccaaaccccttgcatcccaagtactgagataa
aaggcatgtgccaccatggcaagttttatacgatgctgggcatcaaacccagtggccttg
tgcaagctgggcaagtgctctacctactgaactacattcctgcgccctgctgggttattt
ctgccaccaggcaaccagggctggctagatcacctttaggagaaggttgttgctgggatt
atgatatgatgaagaggtaatcaccagaaaaaggtcagtagaggtctttgtagagagatc
ctgacaggttggaacctgcatgttaaccgagcatttgaggtaaaaattagagatggaatt
GGCCCGGTAAACACTTCTCA
Primer
(+)gagggttactttccgtggca
(+)tgagaagtgtttaccgggcc


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.