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Human element [ hs1509 ]


Position: chr4:53,823,605-53,826,463 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: SCFD2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCTGCTGCCAGCTATCAGTTgctgcgaatagcagtggttcttcctgacgtggcagtttat
ggactttcacaaatcccgggtgacccctcacaaaggcggaggccaacatactaaccggct
ccaatagccatcactcaccaagtgcgtttacaaggctttgttcctgtctcttttgtggcc
tcacaatggcagatgcacaccaggtcccacaaccagagaaaaagagagggaggttactcg
tggagatgtcagaaaaagtactccccttgtgcctgacttctttgattaaacccttgtttg
attttgtccagagaggcaagacttcaacatgtagctctaagtgctgggccaggcacccca
ggtttagatgaaaaactaacgctgatagaggtatgtgtttacatcagaccgaggttatac
ttacatttttcatttgttaatataaatctaagttaaccacctcaagcgggactcagcaag
ggctgctctttattaatgggctggtcgttgctgtttttaagagagtgtcattaaccctaa
catacgggctccttgtgtaattgaacagtaaatgtgattatgatcccaactgccatctcc
aggcacttcttggaacacaagttctttgtacaggagaaatagtcagacacaaaggaaaaa
acgttcattttctcttattgtatcaaaattgttcctttagattaagcagggttattctta
ttccccaaggtgggaagcaaaaacaaagacactttaagtccaattagaaaatacactcat
gcgtaaacatttgattccagtctttattgcaaggttatgaacttgtgcttacatattaaa
atctgactgagttgtgaggcccttttgttaatactataaggcaggctccatgtgtttgtt
tatttctgggaaggaaagaattaactgggctcttatcccagctctgtctcaaatcaggta
ctttcctcacttattaatggaggaagggagagtgccggacaagatgttttctgacgttcc
tttcagcagtaacattccataacatggtgacattttttatgttgtcatgactggcctttc
attacggtttcacccccaccctcaacaagtgacgttcatcggcttaccgtcagatccaac
atccccatgtctacagatctcacagccaccataggcacaaggagaaaggaacagctctcg
gaggagcgactctaacttgggagtagttgagtcccacatcagccacccatggccagaaat
acgggaggaaacgtgtggctagagcagaggacaggtgtctctgtacacctctcctgttcc
ccagagatgccttgccattccatctcaaatggctcttacactttttggaaagctctacag
gtaaatacgtttcaaacatggagataatttaccataaatgagaacaataagctgataatc
actgataatcacatttaaatattaacctgaactcattatgtattaggcattatgcagagt
gctttatgtgtattatcatgtgtaatcctcccaataactcttgacaattggtattattac
acctacctcactgattaagaaactaaggcttagagaggaaaagtaatttgcagagtgcct
catggttcagaggtggtcacgttggcatttgaatccagaaagtctgactcttgagtccat
atgtttaaccactatgctatgatgcctcttacaagacaggcagacaggcaaagctctgga
cagggtgtcaagaggcttcggttctagtctcaatctgtaatggctgtgtgatgttcaaca
ggtcactgcaagtattggctgcagtttctttctgcttgataataggaggttgggctgggt
cagtgctcctcaaagagggatgtatgggctgctctacccagaatcacctggggtgcttac
ttgggctccattgcaaatgtacaaaatcagaatctctggggataaggcccaggaatctat
ctgctgaacaagaaccccaggtgattcttaagcatattaaagtctgagaaccccgtgtac
atgattcctaaatctcatctgggctgtattattaaatggcccatggtttccttttgttag
agactcttcaagaatgcaagccattctctttcaatggggcccaaagttaacccccaaata
tccagaacatcttctttagatcaactttatatgacacaagctcttgcttcgtatacgaca
caggcacattcctcctcctctaaaatgtttaaaccatgccaaatgaattccgctcattta
agaggaatgcaaaaacaagatgacatggccttagctaaaataattttcttaaagttgttt
tgcaaatagatgtgaataaacatatggaactagttactgaggaaagggtcactggatcac
agaacactgacagtacatgagggagggaggcagggaggaagagagagactccaaattgaa
acacacacacacacacacacacacacacttgaatcacctatacagaagaaaacaggtaaa
attaggctgtaagtgaacaatgtgagagaaaataggcttcatttttactgagaataagta
agttttgtcaccttgtccacggtcttaattttttctctgaatttatgttcctattttccc
ctaaaaatgtccctctcaccctattatcttcagtctttcccccaacttaccttttggcct
atttatgtttgtcccttcctgctgaaagtgaggttagagtgacaaaataacccacaccca
gtaccttataatttcatgattttactgcccaacaggtaaggatgcaaaacctcctcacct
gaggcctcaactctggctaCCAAGATGGCCAATTACTGG
Primer
(+)GCTGCTGCCAGCTATCAGTT
(+)CCAGTAATTGGCCATCTTGG


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