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Mouse element [ mm1507 ]


Position: chr8:11,584,424-11,587,803 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Ing1 - Ankrd10

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAGCTGACATCACTCTGCCAatcagcctgactccatgaaattggcaagaagctgcaccac
accattagaagttttttggtatatttccttctatggagtcccaacaaatggagctcaact
acgaaatgtaaggcagaccaatacacatgggtgccattagtgaagaatacctcatcacgt
gtcttttcacatgcttgctttagcaaaacatcctttcacttttgtctgcttcaggaaaac
actccttcacgtgtttgccctccccagcaaaacaccatccaacacaactggctttccaga
gaaccctgaagtttccacttcacacccgtaattccagcactcaggaggtgaatcagctag
atggctatgagtttgggaccagtctaggatacatagcaaagctttgtcacagaaagcaga
gagagagagagagaatgagagagagggggaggagggagagagagagagaaggggagctgg
gtaaggtagtttgaatgataatgctgcctcccctatctataggttcatataagtttagtt
ggttcctaagttggtggaactgtttggaaaggattaggaggtatggcctcgttggaggat
gtgtgtcactggaggtgagttctaggtttctaaagacttgagccattcccatttaacaac
actctctgcctcctactttcagatcacgatgctagctttcagctcttctgccctcatgcc
tcgcttggagttgtcatcgactcgaatcctctgaaacagtgagctcagatccaacacttc
cttctataagctgggttgggtgtggtgttttatcacagtgacaggaaagtaaataaaggg
gaggggcggcattgtatggcgcaggatttctcctcttgtccctgggaggtgaacaggacc
cttcctcaatgtgggcatcttgactttatccaaggaaagaaatgcaagatgagaacagag
gggagcaggctgtgccctcagcccacaggtgcccaggttgatgcagtcctattcactgag
catgagaacctcttccaggcctccctcagggactgagtaccatgcagggaggcagcgata
caggcttttctttacctgctgtgtgacttcagagggaatacgttatgaaaaagtgtttac
ttcaaatttacaagaagccattctggtttgccagtaaaagaaaggccggtgctgagacag
acttggagaagtatgacttggcttctgagtaaaaacagatgtcgcttcctgtggctgaag
tgtgctatagatctcccgacattgccctggcatctcaaccgcctccttctccagggtttg
ggagcctcggtcatgccctgctctgtgcctggagggaccgctgtgatagttttactttct
gcagtgcaagtactttctgcctgtgataagtttctctctttccaccggagctggcgtttc
caccaggccttcttctgcagggcaaccagagactctccgagggtacgtgccagctggggg
gtcgggcagccaccccatgggttgactggcaccattctctgagctttcgaaggtgacctt
tgcttcttcatcagaaaccattgctggtttccgaccaacccacgcccagcgcagtggtct
cgaccaaccaggaagctgaccaggggctcctccagcccatcccccatgtcctctctgaaa
tagcagccctacaccccctctcccctcccacctcctcttccttccacatgagctctccgc
tgcccttcctgaggggtttccatgcagggctgtactttcttgacatcttaataagcagcc
ccgtgataaaacccagaagcaatgctggcactttcttgcaggcaggggctgatttatgga
gctgtaggcccaaggcactgtgggtctttttcacatgtgcaaggcatgagctgttccgag
ctggctcaaaagctcttatatcctccacgacccccacctcagcagagttgacaagggctt
cacgggtaacccctacttcatcagcatctgggaaagggcctggtcaagaagaaagccttc
caaacgatggcagtggaagccttgtgctttccctatctgtgcctggtggcatggtgcttg
agtagaggcaagccactgcacagctatagtggctacctagcagagagtaaccttcccaca
ggatctgggctgtgcttgaacacccagtgtagttgccagctggctaataaagactttcta
ttggcttaaacccatgtctgggcagtcttctcagctggataacccacaacaccttagggt
tgtttgaaacagcctcactagccaggctggactggaacttgcaatgtagcccaggctggc
cttaaatctgcctgcttctgactcctgggattaaaggtgacaccatcacacttggctcct
tagggatatcttgcctctggccccatcctatctcccttgcttcctgtctactatgaggta
actgcctcaatttaccgtaactcctgttgctgaggtgccacaagcccagggacaatgggg
aaagagcccaccatgagggatggagcctcgaaaatcataagccaaaagaaatgaaaaaag
gaaggaaggaaggaagcaaggaaggaaagaaaacctgcttcacaatggaaaccagcccaa
gcaaaccagagaacagcaaggcaggacttgcagctacatcatgacagccactgggcagtt
aaaaccttagtggctagtcaagactgaccgaattcagagcagcagaccgggctgaccatc
aacatcgcccattaccaaggcattgctggacttgaaagtgtcatttaatgatgcagagcc
agctagacactggaagatggagagactcttaccatttaggaccctaagccacaggacgtt
gccaaaactcaatatgtgatgattctgctgctaactcaggagcagctttagtctagtccc
aggacagaagccaagccagttgagtcttaagcagcccagatagagacagagtagcaggtg
gcaagaggaaacgcaatacagcaacagcatgtgcctgccaccaaaggaactgaggaattg
aactctcagctcactgcaggagcatgccagggtcaaaggacaacagaggtgcctctgtaa
acttctagagagctgtgcatggccacaccccctccctaaaactaaccacagagcaagcct
tggaacaaggcagtcctgagacacaatcctctctcctgatttttcgatatgtcttagtta
gggtttctattgctgtggtaaaacaccatgatcaaacacaacttggggaagaaagggttt
ttagttcatcatccagggaagtcagggcaggaactcaagcaggagctgaagaggtctcgt
AGGAACGCTGTTACTGGCTC
Primer
(+)cagctgacatcactctgcca
(+)gagccagtaacagcgttcct


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