Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1505 ]


Position: chr3:101,198,724-101,203,222 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Igsf3(intragenic)

Timepoints:
e11.5

Expression Pattern
branchial arch (10 out of 12 embryos) 
facial mesenchyme (9 out of 12 embryos) 
limb (12 out of 12 embryos) 
somite (10 out of 12 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Embryo 5

Embryo 6

Fasta sequence
TGGAAATTTGGAAGCGGTGGattttagggagatggtatttggtttttgccactggggctt
tgagatccaagtaaagagaccttgaattcagtgaaacaatgaactatactctgaatgaga
ggccaggagctactgtgacgtgacaaaccatggatctgtagacatgctgacccgtagagg
acatgcttggcagcggttggtacagggtctgagtggcacgtggtcttcaggctgtggttg
ttttcctttgctgcctggatttcctcagggctctgcagcaaaggagtggagcttacaggc
caactttattttatccttgggagtctcaatgtcttgaacagcaggttttcagcctggctt
caggtcccttcagctatccagggagggaatccttggtcatgagtgacacggctgctgtct
ccatgggtcagtagaaagtcaagtgccttgcaggggggcactatgtggtgactggtatct
gttggtgaccatgataggcttgccaggcagggaaatgtggagctttaggaagaagcacta
gtcccaacgaggctgaattttcactcacatcttgtatttccctgctttgcaaacatccaa
aaggcaccctttgttaaagggtctggagcccagagctacgtgctgtctgtcagcttgcac
tccacacctagttaaggtgtaacctgtctgctgtctggctctcattactttcctaaaagc
acagggccccgtgagtgctggggtgggggaggggggcacttggcatctggttttcatcag
gcagcaagcaagtgccccagtgcatgtgggggaatctggctctttaaacaaagccaaggc
agagggagcgagcccctctccttctccttcttggctctgggagctcccgttgttgactcc
agaagcacccaaaggccagggagacagatgcattgcacactggagttgaaaaatggaaag
atgggcccaacactgtctgtcttcctaatggagcactgttcctcctgctctcccggaacc
cagagcatcacaagtgtttgtcaaggccatcttgctccctggcagcaactcgtatgttat
gctctgagctctcttgacagcccatgtctaggtttaatccctggaatagggcaatatgat
cagcccacctagtctttaagttgtctgtctgtctttctagtcatccacccatccagcatt
cagcaaacatttagagacagcagcatgacttagggcaaatcactgagccccttttcctag
ccagtaaatgaggagatgtgagcattgatgagttagctggcttcctcggggaaagcactt
ggtcctgccctagttggtggtaggcaccatgagtgttggccaggccagggttgccaccct
cctcagctgatgagccacaggttgtcttcagcatgctatggctatttggagcttggactt
atgccctagcacatagtctcaagccataaagatgtgacctttgatcatattgctacctcc
cttggcatttcattcttgtttcagactttgataaggccattgtgaccgcactccagaagt
cagggcccatatttggtggccactgagtgcttgccagtctggaatgtgacaggtgagtgt
aggcagcgtccaggtggcactgaagcatccttgtcagggcctcattgcctgagtctctgt
tgcccttcagtgtgcacttgccatttgaacatttctacttctacccttctttgtctttcc
agcctcctggcagtcatgtcctttggcatggtggcagggatttcttttgtttgccattct
ccctgtaccctgaacagggctgatccctcatgtcctcggctgtgtgtgaggctggaacca
gcattgccctcctgagtgtagggcagtggtagagcacttagtagaggtgatctggggaaa
gtccgcgattgatcactgggaggtgggtggggtcgctctgccctgagttagaggtgcagt
ataggcaggaaatgggcaggaaggcaagcccacccgcaggctgtcctggctggtggcggt
ggcctcaggcatgttctctcagcggtctttcacatctctgctgagctccatcttctgatg
acaattcactcacttctgcctctggccatctgtgacacctggaatgtgcttcaacactgg
ttccagctctctttcagttaattgaggaaatttgtctccccgtcggtgagccaagcgctg
ctgtggtcttgatggttaagtcgtgttgtgctaagaggcgtgagctctgctgcttgccgt
gtgtgacctcgtgtgtcctcaggttttcaagtttcttgaagtgtctggagctgttctgtg
tggggctcatctcccacgaagcctgaataaaaaggcattccactcaaggctagaccaagg
agtactctgtttgcattgatgcctgtgggagatgacagaactgctgaagcctgtgtgtcc
catgctgcagctgcaggggtcaaacggaacaagggggggacaagctgcaagtcacagcga
gttatgaagggaactttgtgctgcacttggggcagggcagggagggcatatgcacaaccc
ctcgttaagggtccaggaaatgaaatgctgaagccagcggttgaccctgagtagaggggt
cgggctgttgccaccaaactgctgctttgtgctgtccctgtccctcacaccccaccaagc
agcacttctgtgtgtcttctgacttccatgagttcttggtttccccacatctgtggcttc
cctgagtccagggatttcccaagtccatggcttctgggccacatgttttccaaccagaag
cagcgggacatttgtgttgcttccagtttgtggctattaagagggaagctgttgtgacac
ttgggtatttgagtggacttaggtttttgtttctcttgggtaaatgcctgggggtgtgat
tgctgccatccagtaactttatgcttaatttgatagggaatatccaggctgttttccaaa
gtggccataccaacccgcacgttcaccagtcctataaggaaagaacctgaaatctgactt
agaacccagagccttgcctgttaacattacagtgtccctggctgatgagtgtccctgtgc
tgtgagcctcccttttaccatagggtatcagggagagtgttaagtcccagggagccagtc
aatggtggagatgtttccttaaggaaacccttaaccagtacagggctgctttccccaaag
gccgccccctcccgctggttgctttcatctctgttatggccttggctgtcactaagattc
actggtggagttgctcagatgggtacccacttgtactctgtggacactggaacaatctgt
gctgtgtggctcacttcccatgtttttgtgggcacctaagatgctggctcctggccagag
atgaagttacagacatctgagcgaagaagctatgagatgtgaggacactgccttagcacc
tctgtagctgtgtgcgtgtgtgcatgcgtgtgcgcgtgcgtgtgcccgtgctgattgctg
gtgtgcaggctgtgaagggctgtccctgctttatggcccatttcaggcctggctttccct
gtccagggctcctcttgactggcaaccagactgtagtttcctgcattgctttcctgctag
gtcccttgtgttttgaaagagccaaaaccagacaggggcgctatcaggttacagctccgc
ttggtgtggagtctgaaaaggagagggaatgtaggaacatgtggttggatttactttctt
tttttttttttccttttcttatttgaggcagcacttcctgaggggggccactgataatta
ggctctctctgattcccgaggccccagtgaagtaaagcacaaatgttgttttctaaagga
ctgttgttgcggccaggccagtgtgcctgctgtggagctcctcctgcagcctgtgcgtct
ggaagctgcctcaccaagctaatgcatgtttgagaaagacagaggcaggcaagtgagtgt
gcctgcctgctgggatgaagatctgagattgaaagttcttcctggcccctattcctgcca
gtaccagcaactgtgggttgacctggcctttccagactttgccttccttaccatggatag
aagtcccatttagtctcacaaggggagagagaggatgtgtcacagcagaagcattttaac
ctatgtgacagtgtgacatctagaggtggccctgtctctgagcatgtgcttattaactgg
aggcaaaggcagcactcagaaagccacctactgtctcttcctgcgacccattggtccctg
tgcctgtccatccaagaggaccgtgtgcccaggattgattttggcaggctggcttccttc
ttgcctttgagcataggaaggtgtggaaatgccagtggcctggaagtatttgggagaaat
agatgtgatgtcacatggaggagaggtttctagatgggtCTTGAGAGCAGGGACAGGAA
Primer
(+)TGGAAATTTGGAAGCGGTGG
(+)TTCCTGTCCCTGCTCTCAAG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.