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Mouse element [ mm1504 ]


Position: chr16:44,528,859-44,534,627 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Boc(intragenic)

Timepoints:
e11.5

Expression Pattern
forebrain (4 out of 5 embryos) 
hindbrain (rhombencephalon) (4 out of 5 embryos) 
midbrain (mesencephalon) (4 out of 5 embryos) 
neural tube (4 out of 5 embryos) 

Embryo 1

Embryo 3

Embryo 4

Embryo 5

Fasta sequence
CGTGTCCAGCTCCATTCTGTtgccaaatagagaacaattataatggtctgatgttttcaa
ataatgcaccatgctgcttctaaatttctcctttgtctttatctgaattttatgtgtggg
cttataaaagctctacacgtactgtgatttatactgggggaagatgttgctgtaatctac
cacatatagacagtatagatactgttaacagtaacacatatagccaagtgtgaaatagga
atttactaggtacccagcaaatatacttgagctcttctccatttcccagactcctctgca
gctagttgaaggtcatgtgactagcggtggccagtaaaactcaaagatgccatctgctac
ctctaggttaagctagtcatgagctagagagccaggcctgtctctccgggtgtggtgacc
ataagtcacatgtttcagagcgcacaagctacaagacggaagtaaataactcaagctgtg
atctaagaagaaataaaccttccttgctccaaaccactcaaggtctgaaaacagtctcat
gggccaaccttaacctttatcctaaaagcttggctcggaatggagtcagtcatgatcgag
ttatatcggagagcattttcaggaaatgctttttggatgtggtggtgcttggactgagcc
tgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtccgtgtccacgggagggagaggagg
atatctatatcaaaaggtgaggctgaacaggtgggtaagtggcattccatgtgcaggctg
ccacaccaagcaatcaggcactggaaagacttttctggagtagtgtggtctcccgccatt
tcccaatgtgtccccctgtgatcctgtgactaacgatccttaacacatgcctctctcatc
agttaaatacatatagggaagaactaagaacaagttaagtaggtgaaagtctgatcttat
ttgaatgactccttaatcctgaccgatgtataatcattagctaatgccttaagacacagg
ccggttttgggggtaggggcactgttgtaatctctttcagtctgcatggacactaattat
tttgttgacttctcatcagatgcggttccattacgacgctttcccctcctcgggcggcca
gagaagggtcagctcagctggtttccctctgtttgcatgtgcacagattatcagctctct
cttcaccacaactcctttgcagcgatctctttaagccacttgctcttttgtgagagttaa
tttaattaaaactaaataatataatctgaaaatccacttaagggagaacaaggaagctga
ggagagaatgaatgagtggtttaggtccaccccctctagcccccaccccccccacacaca
caggagccctctctacccaggagatatcttgggtactatggggacttgtgacactgttca
gccagccaaagacatcacagtcagttcctggatcaagtattagtggccccattcacgccc
tccttctgttttagactggaacacacgatgagggaattgctactttctttcggggccaca
ggggaattgttcagattcaccttcgggagcttggatcccacttggacacttagcataaaa
ggtgacagatgggacgctgggacagggccatgctgtgaagaccagggaaagagcccgaag
tgaacacaaagacagagggaattcacaacctgtgacatctgggctccacgttctgaatcc
attaccacaaaccttaacagaggggagtccccctcaggcaggtggaaaacccttaccttc
aaggcaagggcacttgggaccaagacggcctctctccccgtctctgtctctgtctctgtc
tctaaaggagtgaaggaaaatcaccttttttccttccacactcccatctcgggtccctca
cccttattccacataaattccatttgacaaccctgctaattggataagaactcctatcct
cctaggaggctgttcgcttttcttttctcttactttttctttttctctttttgtttttgg
agggctcaaaacagggtgattgtgccgttctttaacaggaattccatctgctttatctct
ctctctctccattcagcgctccttctgaatatttatgaagccttccctccagccccactc
cttacagccccacctccactctcctacctctctccccacactgctccggcctcctcccct
tctctcagggccgggacaaaaaccttccaactccccccaccctccttgctttagataaac
acaggcagtgtcaagtgtgaggagaaacgggggaagggaggggggttcaactgccagtca
agcccctggccttccatgcggcctgggggcctaccctaatctgctgcatgcttgccatat
gggggctgtgttgccccgggagacactaacaggcagaacggagcttaatagagtccatat
tcattgtgatgcagtgaggtagctcaaggcgccgatgccccttcgccgctttcattcttc
tgtttctctctttctttctggttttcttccctttttcttcctttccaaaaaaaaaaaaaa
aaaaaaaaaaagggtcctggtctccagagagctctaatgtgaagagtcctgggatgctgg
aaaggctggacctaaggttaggagtgaggaagaggatggtgcgggggccgggaagaggcg
cagtgcgaacacatcaggggagcaaatgttacctaagcctgggactgcacacaggaagga
cggggctggacggtgagtgggtaggatttagaatttattctcacaccctgcctaggttat
cccatcattccctccccctacctcctggccatctcagggtcaactatactcattaaaacc
aatggcaccacgtcgccggggcgccaggtccttgaccacttccaagcccatcatagttcc
cttgaaagactcaggtgggggaagggtcagaggcctcttaagaatggactccttgctgag
agagaagtcccactggccaactctggttggtccatgtcctcctctgatcaggaggtgatg
atagttctgaactgtcaaggtccaacagtcttctccctgagcaagtgggcggtccttggc
ccaggtggctccactaccacagcccagagctcctagagataagggggggggggggtcgga
ggggggacataaatggaaggagggaaattgtgttctcctaattttccttctcaacacagt
taagttggaagttatgcttaactaccacaggcagtgtttttatttatgttttttttttct
ggtattaaaaattcaggtgaaaataattttaacaaagttgcttagcagtatatccaaaat
attatcgtttcaatacacggtgcttatctgtattgacaactggccgctgcactggaatgg
tccctggttctttctttgaagcatcttttttagccagcatttcattatacatccaaaggt
ggttccaaccaagtggtcctcctgcctcagcctcttgggtgctgagatcgcaagcacatg
ataccacgactcttttgcactgtcttccccccaccttctagactatcaagtgcaaccaaa
caggtgaagattccaatcccagccttggatggtggtgcatccctttgatgtcttctcttg
ggtggcagaggcaggcagatctctgtgagtttgacgccagcccgagatcgacacaagtga
gttctaggacagccaaagctggatggtgaaacccaagctccaaaaccaaaaccagaagtt
acagtaacagcagccactgttcaacacgcaagcatcttccagcgtccacagctgggttcc
ttggacactccacagtgtcatgggaggtgggtgtgtgaccagcctggtgaggacttattt
ggtgtcgattaaatatcttgtccatgatcacacacacaaggtaaacctcagagtcagggc
ttgaacccttggttgtccttactcttctgaagcttcttgtagggagctggggcttaataa
cgcaggcgattttggtgtggatttagcaattaatagaataattacgaagatcaagtagcc
acatgaagataattgttcctaagaggggaaaataatgcaggtccggctttataaagcaaa
gtgagcatgggatgaggcggggctggcgcataggaaatcggggcgacttgagtgtgagga
attaggagtgatgtttttaaccctttgagttcagtttcaaaaagaaaggaaaaaggaaat
gggtgcgcataggcactttgatagcgccccaattgagagcgattagctgaggttcaaagg
cgcgcagcctcccagggtctttacacttggcctgcagccaacctttcccgtgacttcctc
ccactcgctctaatctcagcaaattgcgtttcaccttctgatccttctgcctgaagccca
gtcccccttttacttcatcctggagggacaactcaccgtcgagcgcctcttccttcttaa
accctcctccaactgtccttcatcctaccttctggaacacttgcacacctgatacactcc
gtggtgattcacagctcctgatgcagacgccaaaatcccagaggacagggtgtgcaaatg
catcttagcatcccctggcacttcccaaggccatactcgatgtttgctgaatggagcggt
ttggtccaggtaggagtttgaggtggaagaggaacattgaaagggatgatttggggactg
agaagtctttttaaaaagaaacatcaaaaggtcccaaccagcgtggccatagctgagtcc
tgtggagactgtatgcgcctaagaacgaggctgcacccacacagattctcctggggcttg
tacccttcattgagctccagctactgcccttggcatcgctccaggctgcagtactggcat
cctcagatccaggatagtacctgcctatgctactgtgtgtgtgctctcactcacttcagg
ctgaaagaggctggcagagcgggaagggagagggaggaggggaaagctgttgagtcagaa
agagaaagacaggtccaggcctgaggagttcaagaaaagagcacggggaggggaagacag
attagaacagagacatgggagagtcaactaagtgagctgagctcccgggatgtgctcagc
tcagggcccggtgctttgtacccatgatcacttcatcttccgcacccagggatgctgctg
tccccttatccaaccccttcatgataacttatggcacaaggacttttagggttcatctta
catgtgtattgcagacacaaactcctctacttgtgacaatgttggaacttagggtcccgc
actaaagaatgttccactcgaggatcaggtatgagcagtactgctcctacctttgaagtg
acctataagaagataaccttaggctatttaatctcttcgagcctcggattaccctctgtg
aaaatgaggctgagtactttgatgggctcctaaagaccattagtgagataatgtgcaaac
gctgcccggtacagcaatcacatagtacatttggagagcaggggtcatgacctttctgct
gaagtcagtcactggagatctgatttcatgcactggcattgtcgcctggtgggcctttca
actaatgtcatttcagaccaaagacatgttgtgttttccacagttccagacccatagggt
atgtggcctttgctcttcccttgtgggctgtatacagttatgcaaggggTGACATGGCTG
ACGTTCACA
Primer
(+)cgtgtccagctccattctgt
(+)tgtgaacgtcagccatgtca


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