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Human element [ hs1499 ]


Position: chr1:92,271,540-92,273,987 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TGFBR3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCTCAGGACTGGGTGAACAGatgcataggccaaatgtaaacattcattcatatctactaa
aataaaataaactgctcggttcacacgtatcacctttggttgacttaaaagacttcatga
acttaatgaaactcgtttctcattttaccaaatgccctcctccatccttttcactaatgc
ttgcttatctggacacatgggaaacgttcctaagatctcgctataacatcaatgtctaaa
ttcccagttccacttaaagaaaaaaatcaaatggactcaccctttcattatgtcctttag
ctgcaacacagcattccaatctcagttacagaacccccacatccctgctggcggtgggcc
agctccaaaactcgacagaacgcagacaaagcatttgggaacagatgcatttgctgcaca
gactttaaatttaatcagtgccaaaagaaattactaatatcacacctcatgcaacatgga
caaaaatactggcggggggggtaatgttttggagaagacatagtaagtaattttcacatt
taataaatgtgatcctcaagcattctaaataccaatgcataccaagttgacacaaacatc
tggtacctattccacataattttcagcactctgattccccatatcacccagggttctaat
gaggagcgtgtgttcagctgtaataaaagtggtaaagatgcagagggaattaaggggtaa
cattataggctgggaccaagacatcgcagtggggagattttattctaatgacaccattgg
ctaataaggtttttgttattgtcccacagggaattctgaaatgctgtcagctgcaaagag
ggacaaactcccacagattgtgggactgggtactacaggatctattctgcccttgggctg
aaaatcctttctacccccatgggatgcaagaatctgtaagaaagggcacccaggatgatt
tctcagccaatagcactgcctcacttcaatcgagcttcatgagaaggaatgttaccaaca
caggatatgacgcaaaaacaaagctccaagaaaaaaacacctggaatgccctgagctcac
aaacacgcctgacgtgtacataacatatgctcatgtttgtaccatctcaaattacaattc
attggaactacagcgccttggggatggagcggtggaatgtaccaccattaaactccaaag
agggcgcttctaccacagctcctacctgggtttttcaacaataaaacctggcttcaggct
gaagcttatccctagtaggaaaaaggtagacaagtcctaaaacttgtaatttggatttct
cagggggaaaaaaactagatttttctacagcacaactcttaggcatatcttatcatggtt
tctttcaccctccaagcaaaatctacatccaaaccttcctcctaacaaactaaccctctt
ccaagaagtcaaccaccaactttttgggccaaaagccagtgcatatttgtgtattgttgt
gttgaaatcatggagcaaccatgttggagaatttcctgtattcaattgtgttttcaaatg
ttcaaaaggaaacaaagggcacaggttctttaggaatccaaattctcaaagtgttgggaa
gtgccaagctataaaaggcacatactcttccatctaaacaagataccactatacaatctg
gacgtgccaacagagggggatttctgcagccctctgaggaagtggtgctgttatgtttca
tggtttttatgacctgaagtgaagcagtggcatgtctcagaagtcaccactggacatagc
aagaggtgtccttgtattacagaagcaccgggaaatagtgaaccaggagatacaggagct
gggttttaagcattccatgatctcttattctatgacaggcttgacttatagatcaaatga
tgcactatatgtgaaaacgctttacaaacttcaaatactattagagacataaagtccctt
gaggggaagagaaataaatgaatgagaacattttctccaatcaaaaactgttttctctaa
aaacttttagaatgattaataaaatatctaagataagatgttcttatactactccctagc
attactccccagaaattatttctatgaattgcactggaaagacttaaaataaaactacag
ctgggcatgtactccctgtaatcatgcctgtaatcccagcactatgggaggccaaagcag
gagtgcttgaggccaggacttcaagaccagcctgggcaaaataaccagacccccatctct
ttaaaaaaatttttttaattaaattaaactatgcacagtattagagtaaaaattcctgtt
ctctgagcacattctggaagtacaactcccaaaggcgagaacaggccatgtttctgcctc
cagggaattccatcaatccataaagacAATCAGTTGGCATCATCTTGG
Primer
(+)CCTCAGGACTGGGTGAACAG
(+)CCAAGATGATGCCAACTGATT


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