Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1495 ]


Position: chr14:65,961,442-65,964,339 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Fbxo16 - Zfp395

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CACACCTCTTTCCTTGGCACcacagatcgttcactgcacattccttccacttagaaacgt
gttcggtgctggatcaggtagttcaagtctgtaagctcagctgtttgggaaagagagtca
caagttctcaaactaatctgtacaaagaagaatgggggtgtagctcagtggtggacggct
acaataacaggaacaaggtctgggttgaatcccacaagatttcaagggttactagccata
agatgcatttgccttagcctgtaaagagatcccctgtttgttcctccatccttcccccca
aaaaaccttgacttcaggcccctaaagccttgtcaggctgctgcaggtactagcagggag
cacgttaaaaagacaacagtgtgtgaccagtcctgagtgatttttttttttttttattag
cttggatgccaatccctattctgaacaccttatctactggtgttactctgtgcatcatct
ctgttaggtagttactgtcgctcctcctccgggttataagttatctctggaatccagcaa
agatttgcctaagataacaagtaggtgaagaaaggggctgcggaattctggcctgaacaa
tccttcctcttgtcacaggcacaagaaagtactgctgggaaggcctcccacctctctttg
ccagctatgcctagctccattatagcagttgtgctgtccccggatgaggcgggggctgag
actgggctgcaggtttggagtggtcagtcatttgacactgaccagtaagagaccagacag
aagcaacaggaggtggagtctgacagtggatctcttcagtcctgaacctcaagttcgctc
accttctaggaaagggcgaccagcgccaccctgaccgcgcaggggtgcgcgtttacgccg
ccggaatgtatacgtttaaggaccgaaaggccgattctggggctcaggcagcgactttaa
gaggttcagccgagcagaggctatagggaagatggagcaaagcgcgttgcgcctgcagaa
acagaagcggcatacacgccgccacgaagcccagcccggctcgcgggctggagcagagcc
aggccgcgcaggcctcggggcggggcgggacgggatctggccacgcccccagcttatttt
tctctccggcccatagcgcgagtcacgtgggcggggccgcgtgggcggggcggtcccttg
ggaggaggctggctgaaggctccgggcctctagcgctccgggacccggcgagagaaggaa
cggaggggtgggagtggaagaaggcatgcgggcggggcctgtcgtgggggcggggcctgt
tgctagggctggcgcaggaaactgggctcaggggcccggcttactggctgcgggctccgg
ctgcttgtttactcctggcgggggagcagtaacccggtgttggcggaggggggtgggaga
gcaagcgcgaaaacgtggcccggagttccaagctgagggagcggaacgggctgggggccg
gggctgcggtgggcctggataggagctggatgatccggcgcagcgcagtcttcaaacaag
ttcctagtggctgcacagctcctcctggcctttgcgccttccaccctgcacacacagtac
tgtggttggtgaagggttgcatgcacatcgtttttttaggccctgaatttcttggatcct
ttaggataggactatggagcggtgtttctagtgttgctgctcgaagaggtggacgcctgc
tgcgtgcttgttcctgagtgggtctctgccacttttttttttttttccaggaactgattc
atttgctggtcctcacgtagttcacatgcttgcatctggccacaatacacacaaataagc
cctttgggggttgttctaggcaattcaatagcttgtgcttggtttttctaactaggatga
gccagagggctgctcacacaacctaatgtgctccacaaatgaactcgcaaaaattagcga
acaccgggcaataccttcctcaaatgagtttccattcatctgaaaaatacaaagcacgga
gaaactgtagctgtacgtggtatttgctactgtatccattaccactacctaaccggttta
tatctgaggacttgaagcacaccacataaagactctagtcagtcagaagtcacaaacata
gagaaggaagggaacaggaggcttttgaattaccccaccccccaaagcgctgaccctatt
gtgtgaggacgtgtgattttctgtcattagtgtctctaatttggaacatcagtcctctat
tccctggtgttagttattaaagatgtattattatcttagattgtgtgtgtgcttgcatgt
gggtatatgtgagtgagtgcaggttcccaaatgaccagaggtgctgcatctcccgaagct
ggagttccaggctgtggtgcactgcccagtgtggggaactgacctccagtcctctggaac
agcagcagccctcttaactcctctgccagctctccctgtggtttcatttggcttcaccat
cctagaatcctaccctttctgggatcagtggtctagtgggtggggctttttatcaccgca
gtcaattacaagtcgtctcccccaacccccatgacaaacaaggaggtagttgggagagaa
aaggctgttttctgctagagttgctaagttgaaatgtcagagttgtgagttgccaacaaa
ctgtgttccctaatatatgaaggaagtcctttcaggggaagggaggctcttttgaggtag
gaaaaataaatgaaactactaagataaacggacatgagaaatttagagactaaatcatta
caaataggtttaaacttgggctctccagagctgggaatgggtctagttccatattagaGC
TCTTGACCAGTGTGCAAT
Primer
(+)CACACCTCTTTCCTTGGCAC
(+)ATTGCACACTGGTCAAGAGC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.