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Human element [ hs1495 ]


Position: chr6:44,518,184-44,521,377 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MIR4642 - SUPT3H

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ATGGCCCTGGACTTGTGATgccatgctgctggcagtggcatttgtaaccacatcagcagt
ccataaatgtgccgtcttccctctcccaaaacaagtccccacggcaatgatcctgcatgt
ctcctttcatacacacatgccccaggctgcccttttgtggctcattttcctttttgtttc
acttaaaccttataggtcacatgtgcaaatattccatagcaggaaatgaagaaggctaga
ggcaaggggccccaagctctcctcaggttgggggaccctggtcattagcaagcctttggt
gcctctaaacgtgcctgtggtgtgaccgtgtttgtgcagtgggttaatgttggctgagct
ggtcagagggtagggtcagtggaagaacctgcagagtgcggctgagcctcagccacccca
gctctccccacatctcccctgcagccacatctgccttgttttgtggcaatgtcagcttta
gtctcatttctcttcaagtttcttaagggcactggctaagtcttcttcagtgttgtgcca
ccgaagaatctggaacattctattagcaacaatagacaactgctgaatgatacggttata
aataatgacatctaatgatgtggttatgttctagaatcaagcatcatgagcatgagcatt
tttagactaaacttgaggttgctatttttttgactgtttgttatgaaactatttaaacta
acagaaaagtataataaatacttttaaatataatgaatagcctaacgaatgcccatatac
ccatcacctagacttagcaaacagtatttgccatatctgatgcagctcccagaacccagg
tttcttatctactctgattacaataatgataccatcttgtggtacagggacatcttgtca
agcacatcacggggattgtatacacagaggaactacgtctcaggatcttcaaagttgtct
tcacccaatccctctatacttactgaagatctgctatgtgtcaggccttgtggaaggtac
ccagtgacaaagatgaggaagtcatggtccccatccttggggcattcacctccattggag
actgggaataaacttgtaaatagacaattgcattgtgatgtgccaagcccaacattccat
tttatagtcccatggaccgagaagctgagaaggctgtcgtctcatctatagagagcatta
ctagatccaagttggggaatcatggcagggactggagccctgcgttctacctttgctgtt
acttagctgtgtgacccttagcaagtcactggccaggtctggatcacagttttctcatct
gtacatgaaaaggtcaggctgaaatatttcaaaggcccccattcagatccaagtttctgg
aactttttatggtgaagtatttaacccacctcaccgcctaactctgcttttttgcctgta
acctccattctgagccagagcctgcaggggtttccagctctgcctaggttccacgatggg
ttctaattccacccccttggaacctgtgccagggctaattctcccagtcaggaattcctt
ctgtggaactaacccatgtctctattgctgcagtttccattaatttcctttgacccgtcc
tcggggggaagctcatgattactgataattctagttaatcctttaactaggaaaaggaaa
ctaaccatctaataggccgaatgagggaatgacttggcacaccatctgcaaaatataaac
ctaaaatattccggagtgttctctgggaggccacagccattaacgccccgagagccggct
actgcagatatttgctcctcatggtgggcacacttctgaactgagccaggaatgggcaca
ggcagggcagcccatgccgtttccccctctctgcatgtttgtggcataaccatcacaacc
attttacttgctaaggcagaacatctccagccccgtaaaaagctttctgacatctctctg
agctgctggcttccccattttcagaagatgccatggtttattaattctctgcagaagcaa
taagaactgggtattggcttaatttggggccaatttattgttatgatagaaaaattgggc
tctgtctcctcttattcaacacaagggcctatagttccccctttaacccctcctgtgctg
ggctcttcctccaatccacttctacttttttgtctttgggatattatttaacctctctgt
gcctctgtttcctcaactgggataatcatagtacctatttcatagaattgttttgagtaa
atactgagttactgagttattttagggtctctctctctctctaccagaaacttcaaattg
acacactgttttaaaaaatctgggaatttcactttctaaaaatccaggttttcagcttct
cgtgagtgactgggaaccacacttaccctatgtccacacaaccacctggagccgagtaga
ggtggctcctgctaaaaatgacatctcatgtctgtccaggtcctggtcctccattccact
caggggcagggcctttcttcatgtcctggttgacccagaggccccgagtctgtggtctgg
gttcccctgtttccttaggctgagccagttgtagccacagaactcaattctcctccacac
ccgaagctgctcggaaatgtccttccagcattacctgcaccaatggtaataggcagctat
gctcactgggaaagaaaatctgaacaagacaaatggaacctctcctgaggcaaatctacc
ccagtgggttgaagatggaattgtaatttggagacagaagaaaagaaaaaaataataaac
agcagcacgattcccattttctctgaattctgacattgttgagtgccaactggacaggcg
cctcacgcgcatcccatctatgccacacaatcatcccagtgaggtgggtgtcatggttcc
tgttttatggatgagaaaagtgaggctcagagaggttgagtaacttgtacaaagtcacat
acttaggaagtggcaaaggcaggctaaccccacccttgattgtgaactggattgggtgaa
agttcttgcagggtgggccagggtgaaggccgccctggtggaactcctgaggcaatgagc
gatcctgctgatgcctgtaaatggtgccagcagcgcaggagattcctgccctggGAGAAG
AGGGGGAATCCAAG
Primer
(+)ATGGCCCTGGACTTGTGAT
(+)CTTGGATTCCCCCTCTTCTC


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