Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1494 ]


Position: chr4:136,310,237-136,314,716 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Ephb2(intragenic)

Timepoints:
e11.5

Expression Pattern
midbrain (mesencephalon) (3 out of 4 embryos) 
nose (3 out of 4 embryos) 

Embryo 1


Embryo 2



Embryo 3



Embryo 4



Fasta sequence
GTGGCTTCCTACCCACTGTCccaccccttggtgactcttatttctctagtaagaccctgg
gtgttcaaaggctgccaactcagccataccctgtgggtggccacagctgtgcagcctgct
ggggcgacgggctgggtgagccctgcccaaccttggcagctgtggaatgagcataggggg
gcacgcacccacccctagatgccccacacctgccctgtctcccaagccttgaatacccag
gctatttctgcctgtccactgcgtctcggctgggatactctttcctccaagaagatctct
gggctgatcatgttggattcggccccatctctacctcctagacagtcctgtgggtcctcc
ttgtcttcaatctccctcaagaaaccctgtcttcccttcactgggtctctttgtctcccc
ccaccatgaatccctggaggtaggggccaggttggattggtacatccccaatagcctggc
acactgtagggtgtttgctggaccctagactgagcattccgccagatagatcccccccca
ccccccggctgcttgctttgaggatcacatcaacttattaggactggcctctgggatatc
cagggaattgtggatgagtctagggatacaggggtagggactagggagaggaatgaaaaa
ggctggctcagcaaggagctgcccttgtatccttgaggcagatctttctcatctggaagc
ctaggttttctcagttgtgggcctggatgagacaactttctacccaggtgtctgggggaa
gggcctggagtttggtttgggcttctggttgtactaaggcagaagcagaagtgtcaagaa
gtctatcagccctcccatgactcgcccttctgagccatacgcaaagtgctttgcaaatga
aaattcaagatgtaaccagtcaatgctcccaagcccgtcttgagcaggaattttgctttc
ccctttgcctccaccatacagtgaacagccctcaacacgccagccggctccactacccaa
gcttcaaatcagcaagcaaataaacctaactaactccagccggcctcccgaagtgccccc
tgcaggaggtggcccattcccctccaaggctagtctgtctccagccccttccttcctctt
ccccaagcaggactcaaccgcccccccaagctgcccccctcttctcttctccattgggac
gtgacattcaccagcgtcactcctggtctcatctgcggagcgccccacccccggcagcta
atccccacaaagccccgcgttgggcccagcatgacaagcaggccccagccgcccgcggct
cggccgagcgtgctcgcaggggccgaggcgggattcggcgcggctgtcactctcgccttc
cgcgcctctaattggattcgcaacacgcagaggtcagcagaaacgctatggagaggagaa
tcaaagggaaggggcgtccggatataaagagaggcattcttcccgggccacaaagacggc
agcccgcgggggcggaggggacccccgagaggggctgcccatctggagggggaaggggaa
ggaaagcgcaagggccggcttctcctacacctcccatgacttgtttgggtcttgggcttg
gtcaccatcctctccgctgaatggagtctggatggcattcgggtcctgctgcaggggatg
tggattttttgaagatggatttggggaagctcgggaatcagccacatgggctcctggctt
tccacctgctccctgggagatgcagcgggtcctcccagggctgtaggccttagtcttctc
ttccgtggaataggacaccaccagctgctcttgcctggtggtgtggagcaaagggccctc
ggcaggggcaattcatgcatcccgcccttctcaacacgcccatgcctgtacagaatctct
caataccgaaagcaaaaggattttattcattccactacggccgaaccatccctggcctgg
gcagagacgactatacccccgtgcctttttatctcacagggacccggagggtcagtaagg
aactagaaaaggtttgagtctggactggaacctgtgtgctctcctgtatgggctctgtgt
atatgctctcgagtgcaagcacacacatattctctctctctctctctctctctctctctc
tctctctctctctctctctctctctctctctctctcacacacacacacacacacacacac
acacacagagtgccagtaggggctgtaggcagcctgggaccagccttgctgcaaagcagg
ccttgtttgctttaagaatgttggctgtactgactctggctcatgaaagagacaagagga
ggaactcaaagggaatttctaagcgacagaaaaatcgatggccctgacatcctggcccct
gaaagagtctctatctcacacacatgcatgtgcatgctacctcagtcagtgagcgcacac
atactcacaaatacctattttcaagtgcgtgtatattatgtctggcttgatacaatatac
acacggacccaggaataaataaagatcttgtcggtgggtgtgcatctgtgcagacacctc
cctgtgcctgtgtggcagcaccacacacaaggaccctgacagcatcccataaagaatgga
cacacatgctcctatccatacacgtctggcaaactcagcagtcatgagtgtgctccttcc
tgcacatacatgtgcaaggcaaagccaggcagacacgaatatgggttgtcatggttcaca
gtgcgctccagagccactcacacagtaaagggcatgtgagcagcctatgcctgacacaca
ggccagggattcgctatatttgcagatgctggggtagtggacggcttgtacatgtgggta
cacaaacatgctcccagaaggctcagcacatacgtatgcagaagggggctcttctgtatt
gatctgggtctctggggaactcccctagacagacactcttgacagaagtgagtgggggag
ggtagctaagggcccaggttgccagggagacggctgtggggcttcaggggttcccagagc
tctcatgcctgtccaggcagtgcaaaaaatgccagcaagcactcctgagccttccaagtt
tgcccatcacacagagatggggtgagagagacaggagtctgttttcctcttaaggagcca
gtataacccttatgggtaccagtcagggtttgcaaagcctgcctggttagaatctctttc
caaaggccccaggaccaaaatctactggggctacaggggactataaacgctcggcatggt
ccctaggttccgtgcaggccacacctggtgttcctatctaacaaccagagtttaagaaat
ggccatctgctaggtgtgcagcctggagcaaagtccttgctttctctgcagaacgggatg
gaaaggacagaagtgtaagtaactgagatgtctcgagatgtcacccacctgcctttgcct
ctacggaaagtaaatgcttgtctactctgccagaccttcccatgatctgactcccaggtg
tctgagtgtgcagggtacagtggaaatgctgtccccagatgctcaccgcttccttgttgg
ctcctctaggaccgtgggcaccaggcagaagcaagagcgattagtagccaagagtcattc
tacctgtgctccggacacagagttccggaaaggagctgaagggcaaagtgcttcacccgg
gtcccagattaaggggtgtagggccctactatgcacctaggtaccctatgggctgctcct
gtgtcacccactaagagcatcctgactagagaacacaaggctacgatacaggttcacatt
tggcctatgctgcatatcaggcttgcttgcagttgaggggacaccatcagcacacatttc
cctgatacgtgcacacgatcctgctctctagcaacttggccaggctctgcctgcagatcc
ctccctggagcaagatcaccatcttcttcctgtcttctgagctcaccaaacacttttaaa
attactatttatttatgagacagaggtggaggcatgtgcaggtgtgcgccagtgtggaag
tcagaggacaactttcggcggtcgggtgtctctttcttccttcttggggcagggtctcac
tgctccagcagcatgctgaaggctgtgctctgccacatccagcatcctgcacgggttcca
ggtattaggtcacacacacctgccagctagcatgtgcatgtgtatgcacttgtgtgtgtg
tgtgcacattgtgtgtgcatacatgcatgctcctacattcacgccccagaacaatttggg
aggacacctgatgttgacctctgacctccacaggcatatgcatgtgtactctcgaataaa
caagaacacacatcccgaaaacacacagaatgtgtggctggctatctgagcaaagaggac
ctcagaggacagggtgtccgAGGAAGACACTGAAGCACGG
Primer
(+)gtggcttcctacccactgtc
(+)ccgtgcttcagtgtcttcct


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.