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Mouse element [ mm1491 ]


Position: chr9:41,742,826-41,744,972 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Mir125b-1 - Sorl1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGACACATACCCACTGAGCCatcactcctgctcagaaaaccaactcttaaagcctagcca
gaagaatcctgtcccaggaaggacaataaggacaaggaaccaggctgggggggagggggg
aggggggattcagaaacaagttatactacagaggccccgggtggtgtggggacataaacc
ttcgaggtaggaatatcaccccaacccagggttgctgcccagtaccaaggagggtatcat
gctggcactggcatgactgagttctgtggaagccataccccaccccacccctgcatacct
gcaacacctccctctgtcactaacaatgacattggggaggagacaggatcccacagcttt
agacctccctgcccaagaaagatgcaacagaagaccccgctgtggggctccttcccctgg
tgactttttcactgagctgaacgaccacctgtttctcccaaatatcagagcatcatccaa
attctctgcactgtgcgctgggatgctttcgagcctgggtctctttcttggatcccagga
aaacaggctgaaaccctggtaggtagataaaaagacacggattgcctagagcccctcagg
ccactcggtgattcctcccgcacccgccatggcagcagttgagcaagaacattagtgtaa
cctgtgtgggggagtgactatgagcttaccgactctacctccttccgaagagcaagctcc
cacaaacccttttccctcctccacctagtcccttcgctggcatggttctctttcctacgc
agaatttatgcagttactcgctttcacaagcacccaggcaggctgtctggaggcaccacc
tgctgccaaggctatggctgaggagatcagcaaacactatcagggagccaggcacccagt
ggacctattttctgctccttcagccaagcaccccctgtagccgactcctggggcccttgc
cagatcctgccacgcatagatcctgcaggggagagcaagagactgagcacagggtcttcc
ctggctgcgcccctgcacgtgcacgcgggcaggtgtccctcccctcccccttcgattcct
gcgcagggctgtggtcctttgtgtctgagtctcctcgcgcgcgtctgctctagactgggt
ggggtgggggaagccggaagcggcgtctgggacttgaaaaatgcctagaagggtggacct
ttccattcacagccccgaccccctccagggcctccatccccctcccccatcatcctcctg
caagcccacaccacatcacctcacctctctttctcagtttcctctcccccaccccccgcc
cccgcccaggtcatctggatgtcattgtccctgtggtggttccccagctacgagtttgca
ttcgctgcccccacgtgtacggaactaaacgcactaaagcacccccactctgcataccct
atacaacttcacttccggggaagactctccaggtacctcattccctggctccatgatcct
cataaagaatggcttctttatccccaaagagtaatgaaaggggcctaggggatatttaac
aagagcagggggcaccgccaggaaggggactacgttttttttgtgttgaacagtgggtgg
atgtgctgccttgtgaggcttgggccaatttcgtcctttccttaagaatataggagagca
gtctaattcccctccgctcctctaaacgcagacttgggaggggtgtgtgtggacggctat
acagtgaaccccattaaaatgttttccttttatttagcttcaaaagctgttacttcattc
gataacagcatatatatatatatatatatatatatatatatatatatatatatgtatgta
tgtatgctgaaaaagatcagcaaaaacctaggacattgttgctttaagaatctagacgaa
aacaccttaaatgaactctgcagcagacagttgaagggggaaaaaaaaaagcccttctct
ggcccttgctgctttttgccattattcatgatgtaatttttcaggtgttagtttggcaga
gaaagattggaactgggcttgttgctaggacatgaatgaagaagaggaatctcattggtt
ccccagtacttgtctggagccaatgagATGGAAGGGGATGGAGTTGG
Primer
(+)AGACACATACCCACTGAGCC
(+)CCAACTCCATCCCCTTCCAT


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