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Human element [ hs1489 ]


Position: chr17:69,253,289-69,254,911 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: CASC17 - LOC102723505

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCCACTTCCTTTCCCTTGTGttggcatagtcaatcatggtaactctaagcaggtgcctaa
caggttgttcatatattggcatggcagagtaagaagctggagtctgcagttggtagttca
gattctgggaggtgctaattagtgcaaatgatcccaatgccagttaatcatcctaattaa
cattttcagtattctggaaactcagtccttggcaattccactttggatgccaattaattt
tacaagtcaatcactcttttttgtgaggatggaataaacatagaataaatgtttctatcc
atgtgaattatttgtattcgatttaaaaacgaaatatgaagccatacccattttcagagc
actttacctgaaatcttctagcatttataaatatctgtctcatatgatggttctttctgg
gcatgccttattttgcttctctacttcatagtaaggttcatgtcccacacaattttggat
cttcttcacactccctactctaccctataatctaatgtgattgcttgcatttagcatgcc
cttagtaaatggttgctaaaggaatgaacaaaacaatcaatgagtaactgagtaaataac
accttgaaagaataaaattgaggatgaggaattatctacaatagtccaggaatgccactg
ggctatgatcccttagtagcagcacacatgttgacatgtgtgctatgaataccattggtt
gtacacacattttctttaagatgtgctctttctacttcagcatgctctgtatgctgcaga
tgtgcagtggtagccatatttcaactctccaccttcacacctcccaccggtgttaacctc
ttttccccaggatttatgtctttttttattgttctgcctggagccatgccagatcctagg
atcaaacttcccaaccttaccaaactcatgggtgaagggatggaaatcagacttggtaga
aaggcctgtgcttctaatgtgggaaaggaaatggcttacttatctccatggaaacacatg
cactttccaattgttgctgaataaatgaaagttgtgttcttaatccacagacctcaattt
caagcaaatctagcagtttttcatggccggcacactgagttttttttttttttttttttt
tttttttttgagacagagtcttgctctgttacccaggctggagtgcagtggcatggtctc
agctcattgcaacctccacctcctgggttcaagggattctcctgtctcagtctcttgagt
aggtgggattatagacacctgtcaccatgcccaactaatttcttgtatttttagtagaga
tggggttgcaccatgttggccaggctggtctcaaactcctgacctcatgatccgcccgcc
tcagcaaattgcattttaaatttcattttttaaaaattattgtttgttatttcatcttac
cctctaaatgcataactcagtgacaatttcttctaaatggtttctgcagaatagtctgga
agcactggattcttaaaagtatgaaattagttattaaaactgctttaggatttagttaac
ctttttgagaattattagaaacttcatcaaatacaacaataaaGACCAGACCTTGAGTCT
GCA
Primer
(+)TCCACTTCCTTTCCCTTGTG
(+)TGCAGACTCAAGGTCTGGTC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.