Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1487 ]


Position: chr10:59,381,977-59,384,850 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Dnajb12 - Ddit4

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTGGAATCCGAGGACCTGAAgctgtggtgcctgcaggctccgtcgccagctgagccacct
cacggcccttccttttccttttaatttttagaagtttaataagttgctcaggctggcctt
gaacttgggattctctagccacagtctcctaaactgtgatggcaggcctgggccactgag
tccagcggaatcttgacatgtgagtctccctgtttgtactcctgctgggtttctggagag
taaggagggacaatctgccacagttctgctaggccaacagggctctctgagggaatccct
ccatgtagaaaaaaggaagcatggcctcagcaggggtcaggtcgggatctgcccaccacc
accagcttcccatcatcccatcccgtgtgcaggaatcagtgtacgtcactacagtctggg
ggagccgacatcctgtttgctagaaaagcctgagtcagtgccagtctccagctttgcctc
tgcagcaacagctgtccagcgtgctctgccccggctttccaggcatttctcaggcctctc
tgcacattcggttcccctccctcctgcaagagtggagccacggttttaaaaaaaaagcaa
aacaaaacaagaaagttgctagccgggttaggagtgtggttcgtggtacacatctagaaa
ggagccctgtgttcgatctttggcacctcataatctgggtgtggtggtacacaccctgtc
aggacactcaggcagtacaagtgggaggatcagacgttcaagggcatccttggttcctta
gtgagttctagcctgtctgggatacaagagacgctggctttttgtcggtttttttttttt
ttttcaggtcagagtttctttgtgcagccctggctgtctttggaacttgctctctgtaga
ccaggctggcttcgaactcacagagatctacctgcctctgtctcctgagtgctgggattt
aaggcgtgcagtttctgagactctaattaataaaaacaataacaacaaagcaagcaggca
acataatttctacaacagcaacaaagtggctactgccaggaaggggcctgagggctgaga
cagacagaggagaagtcaggagcaggagatggtccccgtggcaggtaggacagcttgagt
gaggcccccagatgtggcaatgatgagtggggtagcccccaattcaaaaatcaggtctcc
agcagatagaatgaaagcatagacttgggctcacagaggccaagagaagggggacaggaa
gtggccaatgctcaaactgtgcctctgctttccccccacaagcccctgcggctgcggaca
gaattcccaagcttctggttcatatcacagtagtccacacagtctttatacccgttcttc
ctaagaagggttgtggacaggtgatgggcctgactcaaagctctcagctggtactgtctg
ttcacaaggctatctaacagcgggagggcgacacagaaagcccaggaccagattctagag
tggaaactccagtcccaacagcccgggtgggtggctgttccctcctaagcctcgaagcct
ataggaaagccctcacagaggtcataacgccctcatgaaagccacatatgttcaccttct
ggaagtaattattattcctatttacaacgaagcatctggtgcccagagaggttaaattca
ctgcccgagatctcgcagcagcaagcaacggttggttggcccgcccagttcagagggagg
agcatgtgatgttcttgtacccgtgaactcgggaatacgtttggcaaaaccagggggctt
ttgcgtgcacgagctggaggcccagctgtgttggcaggagctgatgcaaatgtgtgcgca
cccagcttagacagcggcaaacagctcgtaggaatgtgttgatggcggggtgtggggcgg
tgccaccattgccacgtgcatttctgctgccagcccaatgttctgctccctgttgataaa
caacagtctaagcaagcaaatagaccaagcaggggacaaaagaaaagcgagcgagcgggc
ggtgctctggccagtaggggcgtggcgcagggtggcaggctagccaggagtggcagaggg
actggaagttctggcaggttgttttctcagctgggcgtggcagcctgtgccaagcacctg
atgcccgtaaacatgaaaacaggggtgaggacactgtgtcaggaagacggtgttcttcct
gggctgttagacataggtttcattagcagctggaaccacggcaaatacgtcatgcctccc
aagccggaggattcctcaaaagtcagtctcttggaagaagctgaagctccaagcccagca
aggctcgtgattgctaacccgagcctgccatctggcacaggcgtggcctgaaaggacatc
tgaatcccgagagagttctggggttctacttcacctcattattgcctcccagaaactcct
ccagtagcttcccttccattaatttaactctgctccatctctgagcctgccttgtttctc
acctccacctggaagccctccaggtcgtcctaagaagtcttcagaaagatcccccaaagc
tcactgttactgtctagtgagctcctgcagggcactggatgggacgtagtgaggagagag
accccaggaagagccccagggagtgtttacataggacttccagctcagtgctggggagat
ggctctgttcgtaaggtgctggccatgcaagcctggggaccagagttcccatggggttca
tgggaaatgctgggcatggtggcatgcttcggtaatcccagcactgcagaagcagaggca
cgctgatgcttaagcctgggtgactcagggagttTCTAAGCCAAGTGAGGGACC
Primer
(+)GTGGAATCCGAGGACCTGAA
(+)GGTCCCTCACTTGGCTTAGA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.