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Mouse element [ mm1480 ]


Position: chr6:112,758,522-112,762,994 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Srgap3(intragenic)

Timepoints:
e11.5

Expression Pattern
forebrain (5 out of 5 embryos) 
midbrain (mesencephalon) (4 out of 5 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 5

Fasta sequence
GCCTTGTGAGTGTCTTCCGAggatttgtttaacctgtgccccctgaagaaaaccttccta
gcatcctgtccccaatcttccctcacgtcattccttctcaaaggccaacaaagaatccta
ggaatcactagcgtgcgttgactgctccctgtgtactaggtgggcatttcatctcatctc
ttaaccttgtaccagccatgggaaggagatgtccattagctccactttgaaaatgagaaa
gcagagtggaaggcatcaagcttcgcccacgtggctgaaagagacggagacggggctcag
ctgtggtactgctctgcctctccctctgatctctgcttctctcattttcccaaagctccg
tggatttgccaaggccatgtaacgctcaagctccccttcaggactaagaacatcctccta
ggaaatgctatccgcggctgaaggagccatctgtctaagcaggcacccctgcctccccag
cccacacttctagagacaagcaccaagcaatgaatagtcagtagaagggtggaagggccc
aacctctaagcacaaggcaggggtctcagcttccctataactgccacacactttgtccct
gaacgccctgctccccatacctttctccaggtgaggacccaacctattctgctctgtgcc
tgtctgagagccagcttcctgcagaagccaagcagtgatgaatgttaaccagttttactg
cagcactgaatccccaatatcacatcttcttgaacctccctctgagagaacttgggtcgg
gatgatcgcccctcacccctgcatccaaacgaaccatttctttgtatctactgtaacttc
tatactactctgggagctccccaagagaggccattgtgtttggactatttccagtcttgt
tcatcacctatctctgagttggatataaaactgaagcttccaccttgttgaatttcctat
tctgtaaaatggggtgatgacactatgttcctatcggacagatgtaaagaattcagagca
catagaccgcttagggtcttgtatagactaagcactcattaatcctttctttgctacaat
tccttatctgctgtcataatagcactagtctatgagtactgaacgattggaaaagcctgc
tgaggcctgcctcacaggctgtctccctaggagacacaggaggcaggctgaggtctctca
tctctttgttctccccgccccagtgcagacctcactgctggaccctccagcttgcaaacc
ctcactctctcctgcaagggagaaaaaaatgaaaaataaacttggctttgaatccaaggc
catggctgcttttgatctctgttacaaagcaaagcaattatcggacacaaaagccttgat
ttatttatgaaattcgatggacatcttcgaggcggggacgagaaaactcactcaagagca
agtccttgttgccacacagtgaatggctgctttcaaacactggccccccaaacgccctct
cggctctgctaagagtctctcctcattagtgcttcttccagaatgctgcagcttccaaca
atcaaattcacatcacggccagggcacgtaattaaattctacaggcatcggagtgcagaa
taatggacggctattgttaaggaaactgaagaaaacagattgaggctgcggatgggatgg
gcttcaatacctagtctcagcaacagacaggggtagaaggaaagagtgtgacacacagtg
accctctcccagctgctgtaccatgaaggggtagactcagagctgggtcaaatacctaag
tttgggaaaagaatatgcccttagcagacatgggcctcagtttctgtttaacaaggaggc
tgcactggaagtccttccctggcgtgtttccacagttggctgagaactggttagaaatgc
agatcccccgacctactaaatccacaactgtgatggtggagcccagcagtgtacctagca
caccttcaggggactctaacgcaggctagactatgacactcactggcaggctatgtttaa
gggtaagacctcaaactcaaaggcaggaacggccaggatgataaaacaaaggagtcaaca
cagcatattagacaccattcgggaggctgggcagtgaaaaacactgttttgtttggtttg
ggtttggactttgtgagacagggtctcaagtagctctggcttgtctaaagctcactgtgt
atagctgaggctggccttgaactcctgattttcttgcctccatctcccaagtgctgcgat
tatatgtgtgtgcctgccaacctacccagcttgaaatctccaagttttaaaatgcagtgg
tttctaacctgtgagttgagacccatttggggagaccaccagaaaacacagatgtacaca
ttatgattcataacagtagcaattatgaagtagcataacagtagaagttatgaagtagca
acaaaaataattttatgattggagggtcagcacaatatgaggaactgtattaaagggtca
cagcattacaaaggctgagtaccactgtcttaatgtaatgcgagccaaacagattatgct
taattaagagctgaatttggcttagactactgtttgtaacctcagtcctgatgctatctc
tgacctccgccatgatctattctgtccgagattccaactccctttcccaattgggagact
cacatttacccttcaacaccaacctcccgcccccacgcctgccagtcaccctcatgttta
actcattctcaaatctcagccccactttctacatcctaaaggaaaagactcaaacacaga
gccaatcaattgtcatgagaaggtatataggctacttttctattggtatgataaaccacc
atgaccaaacaacttatgggataaaaaagtatttaattgggcttatggttccagcagatt
agagtctgctatggtggagtgagggcatagaggcagaaacagctgagaaatcacatcttg
aaccacagaaggagacaaagagaaggagcctttcgaaaccaccaagcctggacccagtca
cacacctccttcagtaaggccatgcttcctaatcctttccaaacagcagccatggggacc
ggggctcaagacttataggagacatcattcaaatcacccaagaaggtaacacaggcaaag
acgacatgaaaaagttatgatatgagcctttccaacagaggaggagtgtatgccttctga
aaaaagctaccttctcactgtctgaaaagtcccttaagtcatttggccagaatctaatta
gatgaagtttaaagggaacaaatgtgtgtgaggggtgaagaggcacagaatacaggccag
attcaaaaaaattgatgcaaaaaaaaaatctagaggtttcaggtgaggcatgatcagtga
gttgaagtgttgagacagcccgctccactccaggctggtcagtcctttctcctgacaggt
cagaggaactcaacacagcccatagtgagaagcctcaggggagagcacaagcaaaccata
gagaagattcaagcgaacagaaatatttgtttctaagaagcaaagacctggctggattct
tttgatttctgcccccaagcaatgaacaggtttctgcatttattggatatttgtagccct
caagggtgccgccagaacaaaacttgtaatattgcatttctgcatcgaaggactgtctat
tgatcacagctgtccccagacagactgagcaatcctgagaggtaagatgcatcctttgtt
gagggacatctagttaagtatgatagaaggagtggaatagagaggccagtggtcatctat
tatctcttgtttctcataaggacacccgaacttttcttggggagccaccctcacctatcc
tcagctctgtggatcagcggaactgagcacctcttgctccagaggtaagcatctacctac
acttagtcaaggaaggtagcttcttgaccacagacacgaggtcactgatcatcacatgac
tgtgctgggccaatcagcccttagaagatctaatgctagataaacggacttaaaatagac
aagatatgtaagcctggagctgctgggagccccctggtcatgagaatgggacaacctaac
aacaacaaaaaagtgtcaatcttctggaaaaatgggaaacagataccagagtcacacagt
aaaaacaaagagactattttctgataataatctttgtgtcccaaaagccccccgcgcgta
aagccaaggtcatcctggaaatgctgaaaacccccctttctcccaccttgaagcagggtg
aatcgtatttctattgtccacagccatggtcctgatcatttcagattgcctctaggatct
ccttcagtcccacttggctttgactgagccagatccctgctcgtaaagccagcccaccac
catgaacttccaaATGACTTTCCCTGGTGCTGG
Primer
(+)gccttgtgagtgtcttccga
(+)ccagcaccagggaaagtcat


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