Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1478 ]


Position: chr15:90,846,953-90,850,479 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Kif21a(intragenic)

Timepoints:
e11.5

Expression Pattern
forebrain (3 out of 4 embryos) 
hindbrain (rhombencephalon) (3 out of 4 embryos) 
midbrain (mesencephalon) (3 out of 4 embryos) 
neural tube (3 out of 4 embryos) 

Embryo 1

Embryo 2

Embryo 3

Fasta sequence
AAGACAGAAGGAGCCATGGCtgggatctcagtataacgtatgctgacctcatctctaaag
cacgtatctggaagatgaatatctgatgctaactaaccacatgggttttctcagcttgaa
gagagttccgacagcaaacttcaggaacaaatttcggatctcgttaacccgcaggtttag
acggtaaacagtggaggtgtgtatactgaagacttcatctgaaattcatccaaattatct
ttcgaattctaaatttagatagctgaagttcatttgataagggatgccatctgaatggta
cagaaagatttggagcatgttttttagttcacagaggactaccatttagttgggaaacac
atctgtattacagacactaaataacggttaacacagatgctacaaaccaggttaatttca
aaaaaaaaaaaaaacagagacggatgaatacaaaaatgatcacaaaaatcagagaataag
atatataggaaaaacaaacaggacgtggtggttttattcccccaaagggtaaatgaatat
ttgatattttcaataaagtaaggccatagatagtgcaagctaggtgggagtagacaggca
tggaaaactacaaagaatgatcagatatatatatatatatatatatatatcagattccac
actatccaccccagcgcacatcaatcaccatttcttgcaattcccaccaccgacgcaact
gctgaccgctgccctgggattgcggtcgtgtgtgtgtgatggattttgccgtgcataaag
gagattacctctgggttgctgagcctttcctcccaggctcgctcacgagaccggctgcat
ttataagcagtcggttgctcctttgtttctttgttgaatcctgtaattccgcacacaacg
tctgtcaatcatttatgctggccaggaggcaaatggcaagtggaaaggccacactgacca
caggaggggctccctcagctggggacaaacaagcagttggggctttcctcagctgagagc
atttgtcgcactgtgttctcacagtcccgggctgaagggatccagaacagtcacgtcatt
gccctcaatggtcaaagagtcaatatggttgagcttgtgggaaaatgcgtcctttaagaa
tgatatttgatactcacattaaaagtgaacatcgtcacatggaaatctttcagaaatgaa
tagcatcctcaagaatctctgtgaactgaactcagtgttaatccttcactgagctctgaa
cccctccctcctgcactagccacttaaccacttaatccgcctcagcttcatctagagggc
gcccatagcaccgcataagacctgctgccgcttggctatagatacctcctcccatttcta
gacccaaatagagacctacctactccatgggtcgtaagatctgactctccagcagccatg
cacacatgcccaagtagcaggacccatgagggctacgtgcaaaggctcacccgtgaaaat
aacagggtaaggaaaaaaagagagaaaggattcccctgtccttcctctgttggttcggac
tgagtatttccagatggctcccacagagacaatgctgcttgtgtttacaaatcaatcatg
agtgcctgcctcatatccgacatctctccctgctttgcctcattcttccctcgatcttgc
tgcaccaagactgtactcctggaagagcaagagttcctggctctactgtctaggaaacca
agactaagccaagttctattaggctaacagattgttgttgttgttgttgttgttgttgtt
gttgttgttttaatatactttctccaaaggactgatggaaaggactaaaactttaattac
cactatatcacagtggaatgagaatttaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtattacaaagaaaggttgggcaaggttgagcatcaaagcacgtacaatg
tacatggccctgtaacgagttttggagtgacttcatagaacgtccttcgagtctcacaat
aggctttccagctttgttaggaagagcatggaaagagaagaaaagtagatcaggtttcaa
gccatgcaaggctgaggctcgcacagccacaagaagcctaagaaattggattcagtggcg
ctgctgaccagagaggtcctagctatgccaggccttgagtatctaacaatgaatccatct
ggcagaaaccctcactgcgcctcttttgggaatgcttggtttcagctcttttcatcccac
cattcagatgctaatcaatgctcaggggcagccaagcagtgtgtctgctaagccgatttt
ttttttttcttttgataagtctggtacagcctgcaatgcacacgccatgttaatgtcaaa
tgtagtctttgtctacttatctcgttcactaactcaaatttcattttctttaaccaaatc
ttaaaggaaattatatgtgtttctctccagataatctcccttgctactctgggccaatct
ctttgcagacaatgagacataaataaagcatgaacagacactttttaatttattctattt
aaacattataactgtcatgagattcttgtgattttcatatattaatattttacagacggt
attccttaaccctagatagtagccaaagtcaaaagaaactacgaagagtctacagatctc
gtctatgagaatctgcataacagatatgatgtagcacatgctgttttacctttattaagc
cattcagacctaggaacttgggccaaagagaagtctcagcaattaaaggtacctgctgct
gagtcggatgacctaaattcaatcctggaactcacatggtagcaacagcaagcagactcc
tgaccttgaccttgactatgaaggtgtgtgatgagatgcacctgtatgcatgggcatgca
cagacacacacaataaattatgtgtatgcatatgaatttatgtatttagtttttgtttag
gtatgataacacatgcctttcatatcagcactcgggaggcagatatatcaatatgtatag
ttctgataattcataagaaatcagaagcccaaatatctaaagacagccatataatctctg
tgagttcaatgccagccataactacatagtatgcctctgactttaaaaataataataata
atgctaattaaattaaacttcaggcaaccaatggctgttaagagaaggagaatcagtctc
tccagaaacgagtccccaaagctcatctagtcccaaaacatcagccctatatacatacac
acatgcacaacattaaatgaacacagcattttgtattatgtgtgtttcttattattgtgc
atatatttactttagtttgcctcttataaagtaataaaaaaatacctcgcttttctacta
aaaaaaaaaatgctgatgggaaataatatacatccccagtctgtaaaaacagaaatgatc
agaatcaaaactaactactcatttaggCTGTTGTGAGGCTCAGAGCA
Primer
(+)aagacagaaggagccatggc
(+)tgctctgagcctcacaacag


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.