Mouse element [ mm1471 ]

Position: chr16:35,584,609-35,589,859 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Sema5b(intragenic)

Timepoints:
e11.5
Expression Pattern
forebrain (3 out of 3 embryos)
hindbrain (rhombencephalon) (3 out of 3 embryos)
midbrain (mesencephalon) (3 out of 3 embryos)
neural tube (3 out of 3 embryos)
Embryo 1
Embryo 2
Embryo 3
Fasta sequence
CTGCTCACTGTGAAGGGCTTggatccttttgcttatttggcagtgatttgtgaggcaaga
agagaaggtagctcaggggtgcctttccctgtcttcggaagataggtgcctccctaaaat
gtgtctccatagctgaaaggcagctccctacctccttagcccagaggaaggactcactgg
caacaccacattgcagaaaacttatggcaggattctgatttgtgggatggcgcagagagg
tgcttcaggagatacaaagaagcaaatggcctgcaaatcagccttcagggctttgtggtg
cccatgaggtcctctcggaaacatttgattgccatgatgccagatgctggcaggcgagtt
tacatcccctaaacaagcaactgttaaagagcagagggccagaggtggcaggacagggct
gcagggagtccagtcaacccagagagcacagcatactgtgattacagcccgggtcttcat
ggcctgtgcccaactacatagaatctatctcagaacagcaatttcagggcctctgcctct
cctttctctgccccccacccccaatgagctggttttctctggacagcttgatggaaatag
gaacagagagagaaatctcaccagatgggtagctttagggtgaggatgtgttgagatttg
caaatccctggcctagaggcagagcggctcccacctgtgctgtgagtggtttgggcctgg
ttcttgtctcttcttgagactagtgtgaggcttgctcagagtaacacaaagatccagagg
ttttttttttttttttttttttttttttttttttttcttgaggcccagaggcccaaagtg
ctcctcccacagagggtagagccctatcacaggaccaggaagttgtcctccccgcacccc
aaccccgagccctgggttctggtaggctggttcagagcacacccaggttccaagtcagga
caatgcctctgcaggcacagtgcagccctgtgtgtggtcccttctctcatgacttgagct
tggaggacagcagcagcagcagaccgcacacaccaggcccttcctggtgctaacaaggca
ggtctttgtggcttcagggaagtagtggagaaatgaagtcttccgtctgaaactagatgg
gcccgaggaaccacgatgtggccgcagtcagaatgttctgttcaaatgtgaaggggttgc
ttcctttggtggaacagaggcctaaaggctgaaagatccacaggtctgatccttcttagg
aggtactagagggaaggcctgtttcccaggaagcagcttgctgaattcattgaggagttc
atttcttctattcgcgccgagtgcttaccagccccatgatgggtgatgctgtctccaatt
tcttgtagctcatgggcaccaaagaggactgtgagatgagggcacccatacaaacccaga
tgagataaaggagataaaagttggttttctggctcttctccaaactgagctttctgggcc
ctgccccaaggccttcaggagacaacagatgttggggggggggggggcaagtcacagctg
gaagcaaccctgcccctggctcccaagcgctatggaggtttgctaatctctgccctactg
ccctgattctttgctctaggttaattgctttccataatctgctaactgccctcaccccat
cttccttttctactgcttagctttggggcaagcctctcctcaggggcctctggggccctc
cagtgagaccctggtgggtacttggctttcacttgtgttgccccctgcctctcagactca
ctcttcactatggtttcatgctagatccgggagccatgacttcccctgtgccagggaaag
aggctaccagagcccggctttaccataacagccccatcacttcagcttctctgtgtatac
actgaggagctgttctcacagctggtctcacagcgaggaccacaaggaccatggaccacg
gagcggcagcaacagcatgaggaaacttgttagagttcagggtgaacctgggaatgggag
tccaggcctgcactcttagcccttgtgaagctggacaggaggattgccccaagttggaag
ctaccctagagcgacatagcaaaatcttattttatatataaatatatatgtaaataataa
ataaataattaataaatataataataaatacacagaaaaacaatatatttactttaataa
aaatatatgaatatataatatataaataaatataatattagatttaggttttatacatat
atatgggctgagggcccagcaagcaagttgtcatatccctctgatgatgtggatgcagct
ggagctggacagcttgcttgctgctctaggtctcccccccacccacaaggtcccctacag
ttttagtcccaccatgcctctcgtcctcttcctctcgtcctcttccagcctgtacctctg
atgactctcagaagtcctgtaagtacgtcctagtccactgacagttctcctgagagactc
actaacttcccaaaatctctttcacacaaaagctccaccacgctcttcttgcccaccttc
tcagctccttgaggcctggcctcctccctctttgccctcccaaacttgagttttatacac
gaacatccgctttctcatattcttgaattctcacattctcctggaaagggccacaaagtt
tgggggtgtttttgtagtgggtggagcgaattccgctgagagatttttctgacttgccct
gagtcagactggtttctgccccttccagtctgtttctggaggaggctgcagaggtgtctc
cacaatagaatgaggcattgggggtatctagcgcttatagccacctgagagctgtgtagc
ctggcaggatgctccagtgtaaacactcctgccctttcagtgcctctggtaagacctggg
cagggattttcctgttgcttcacctgggtctccagaggaacagaatgccctaacatctct
ctcctgctgctggcatttagcccattgctgggttaattcaagcaatactaataacctgtt
tgcagggaggagacctcttgcagacccttaaatcctgctctctggggcactgataacaga
ctaagaatcctgtctggcccccctgcagccatcaaacagtgtgctcaagtctgtgtggct
ggatgctgcaaaaacacggaaagaaacagcatttgtgtttatcccctgatactggcatcc
aggaggagggccgaagcgatggtttcagtgtttagaagggctccctctctcctaccgcct
gcccccatggcttccctttcctgagtcttctgtctctttcctcctctgttagatgtaggg
cgtcagtctcccgcagatcgtccaatgccagcccatctggatctatcagatcaggctccc
cattcctttttggctgcctctgtgagggcctgggcccagtggagacctctccgggcctct
gtgcggtctccaaggagcctggaagcaatgcagtgagagaaagcagtctccccgcccctc
ccccaccacgctcctcttgcccacgtctcccacccactcagctccttgaggtctggcctg
ttccccctttgccctccaaaactcatgttttatgcaagaacatcgccattctcatggaaa
gtgcggcaaagtttgggaaagaattgggaaagaatgtccgaccgcttttgaagagggtgg
agcgaatgcggggttatagggttaaccgtagctgagagatttccctggctgagtgcacgc
acgtccgtcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtctgcgtgtattccaacactcaagactcactccctcattc
cacacaccccacctctggagcctgcttcagttccagtgaccctcctgccttgttttcctc
caagagacaccagaaggggttgttgatttttgttttgttttcaaacattagaagaaaaaa
atgaaaatatatgtgaaacttgggtctggatatatatttttttaatcttagggaatccta
tgtttttgaaacataaaagtggtggaatatcatttatgtaaaacctggagtcatggttgt
tggtcaaattgcacactacaggatgctccgttggcatctgcaagcttcctgttgtaaaag
tacctgttctttcagaaagcagggcggccctcccacccgtccgacggttcccgggcaaaa
ccttgaagagaaaaatccgtcagcagcacactcagtgtgagacaaaagacatccttatgt
ttcctggtgaagacagacaagtgctcattgttagcgtggggaatggtgagaagggcggag
gaggaaagccctcagatctcggggcgcaccagctgctccctccacgcggtcagccccact
ctctccgccctcacctggactcctctctgagtctacactatggcaggcgctgctttcttc
tcacatgttaatgtgttccttgatttgtagtgcggttttccaaatgtgagctgtgacttt
cgcatgtagtaggggactgagggtacagaaggaatccctagtcacgtgaccaccatggga
cgaggatcagcttgaaagtcacacccaccctcccccaccccaccaccctcagcttactct
gaaccccaaaccactgtctgcagctttgaaatgctggacatctgggcactatgggagggc
gacctaccaaatgccacagtcccctctccccacccctgctcccagtccactgatgtccaa
tccctgatccagaactttcacaataatttcaagtgctgcggacaaagttttcccattgtt
ttcattgaagtagtcgttttattttcttctatacttatgagtggaaatatactagggttc
ccaggaacaatcgattttcttttcttctgtaggtcatttagaaaggaatgtcaaacaagt
tgcatccttataagcacgagggaagattgatggagctcgtctgcttttaaatcttgtggc
atgcttttgggaaatagtttgggctcattaaaacattctattctaagcactacactcatt
ctaaaaagttttagagtccagaattgtaatcggaatcatatatttcaaagaagtctttgg
gaccaaacagaggagggaattatacatacatttttttttcctcttctgtatttttcctag
gcctccttcacATTTCCAGCCTTGTCCCTGG
Primer
(+)ctgctcactgtgaagggctt
(+)ccagggacaaggctggaaat