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Mouse element [ mm1461 ]


Position: chr2:154,251,162-154,254,198 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Snta1 - Cbfa2t2

Timepoints:
e11.5

Expression Pattern
facial mesenchyme (3 out of 4 embryos) 
forebrain (3 out of 4 embryos) 
hindbrain (rhombencephalon) (3 out of 4 embryos) 
midbrain (mesencephalon) (3 out of 4 embryos) 
neural tube (3 out of 4 embryos) 
nose (3 out of 4 embryos) 

Embryo 1

Embryo 2

Embryo 3

Fasta sequence
GCACCCAGTAGCTCCATACTatattacattcccacaagcagaatggaaagagatttgcta
ggactaagtgccatcaagaatctgaggatgtaaggacgaggaagacctcaaggagccaag
actttggggttcacagcccccttctgaagaaggcagctacataaaaatgaacagactatt
tttcattttaaaaaccatttatttttttcttttacagatatgaatgtttgtcacattgta
tgtatgtgtactatatgagtctagtacccatggatgccagaagagggcagcagataccct
ggagctggaattacagagggtggtgagcttccatttgggtgctagaaattgaacccagat
cttctgtaagagcagcaatggctctcactccttaaacatcttttgttattattttgttgt
tgctgttgttttgagacaaagctctggctggaactcactacgaaacccagaagtctattt
gccacggacctagctttcttaactgtactataacaaagtctgtcatcataaagggcctct
atgtccagaatacatttctttttcttaaggtaatacattaaaaaataagctgtgctagcc
atgtggtttgtggtccccctgtgtcacagctgtcagatgtacaccacatgaaccatagct
cctacactaaagtttggcttttccttaactctcccaggcacagaaaagtcttgggactca
gtagataaagctttaggaagactcaggtggagtaggaacactttttccctccagtttcag
tgatgtagtccctgaactgttcagggcctggggcttctccataataaaagaccttggctc
ccaaagcgatcatgaggattaactgagacaagccttcaactccagcggggacgggggagg
gggcgcttagggtttcacaccgtattgctattgttggtaatgattattattactatgacc
agggggactttgggagtagcaaacggaaggatatatgcaaatcctccagcgcaatgtctg
tcacactggagaccttcataaaggctcctaaccgccggttttacaccctcattacccccc
tcccaaccgccatccacatcccaggccacttcacataggttttcccagcatccttcatgc
cttctcctctcccctcccccccccccccaacccattgcgtgatcttcttgccccacagcc
tcagcagagaccacagaaagtgcccacggcagctggccagggtccgggagaggaccgggc
gccaagggaggcaggttccgggcagacccccacccattgtctctgctcgccagcccgcca
gcctgcggacccgccagccagctgatgtcttgggtcgccgacaccagctggttaggcccc
acaacacctctaaacgtccttctccctggaccctcccagtctctcagcttgcccctcaac
cggagtgaatcctcacccgatcacagggcctgggcttttgtccttcaaatcagtggctga
tttgcattctttggcaatttgcatagccacttcttttgtggagggcgaggcagttgtgga
gcccgcctggtcctttggtttttttttttttttttttttttttttttttttattccggta
attctatttttgtaaccctggctggtttggaactcactatgcaactcctgcctctgcttc
cagccatcttggagccgctaggcacatatagctatttaaattaaaattaaataatcttag
tactttggtccctcagttgtaggcatcaaacacactagtaggtttttttgttttgttttg
tttttaggttttagcgtaatcctggctggccttgtgttttgttttgtagtaaaggctgac
tttgaactcctgatcctcctacctctcctatttggagcgaagggaattacaggtttgcac
cattataccagcagagctccttctcctgtcctccagtcttgcagtcacatagtaaatgct
caccagtagccataaatagggactggggagtgtagctggagagtgaagcacttgcttagt
atgtacacaggtcctgaattccattaccaccaccaccaccaccaccaccaccaccaccac
caccacctccccacacacacacagacactcaaagctagattgctggtcatgctggtacac
acctgtaatctcagtacctgagaggcagcgacgagagaggactgtcagatgtgtacgtgt
ctgaggcacacacagtagttagcatagttccaggctagccaggactaaatagtgagacct
gtctaaaagcaaataagcaagcaaacaaagctaaagctacttaagggactctcgtactaa
gcagtcagtgtagggataaatcacgatcatagaaacttctgcaggatggggctgattcaa
accctttaattcaaccaattttctagactagaggtcttcttccattcccagcccttctcc
ctgcccccatcaaggtaatgaccttggtgagtaggtgtccttttgttctcagaaggcctg
cacctgggtagagggcggagagcggcaggtgtgcagctgtgcccgggagcgtcgagaggt
gggctccattgttgttctaaagcaaacaccggcgcccaactccggtcttcggcttcagct
ggagcctctgttgcctggaggtgaatggggggaagaaaggcttcgggaaattgtgaaccc
agtttccaccagcactcccggggagcttaaggtcattcctcctccagggatgagtggttt
ccagcacagctgacacctggagaaggtgtgccagatggaatgcgctttaaggagcggggg
aggggacggcctggcaatctgcccgcagttgcggcccagctgcagcagcaccggctgtac
aagccttgtgtgggtcttgtctaacctacttcaggttgtacaaatcccacaccctcggag
gccccacctcacctctggagggaatcgggagtttagtaagcccagcagtaatatttttat
agccatgtggctgtcttGCCATCCCAAAGTGTACACC
Primer
(+)GCACCCAGTAGCTCCATACT
(+)GGTGTACACTTTGGGATGGC


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