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Mouse element [ mm1459 ]


Position: chr3:65,777,795-65,780,286 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Ccnl1 - Veph1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTCCCGGAGATCAGTGGAGTgctggctggattactattttgtatttagataaaaggacag
tttacacctaaattttaagatttcagtcgagtggtgatggctcaagcctttaaatcccag
cacttgggagacagaggcatgctagatctctgagtttcagccaccctggtctacagagcc
ccagagcatccagaaatagaaacaccctgtcttgaaaagagaaaaaaaaataaataaata
taattgtaggtactgtagtgactcgtttataatgccaattttactataggtagtcagcgt
ggctcggctttaaacttaaaacctcgacacctagacgtcagcctatagtattggtaaagc
atgctattttctagtgtgttgtgtgggatttgcggacactcagtcccaacgtggactgtg
ggagagaaagctgtttctgctctccagtaaagcgtttgggaacattcaaaatgccaaggc
catgacatcacatgttctttatcttcttgataggaaagctggtaaatgttctggggcaag
tgaattttgtaaacaggtcattacgaagatattaacaaggtttacgggagcctggtaaga
ccttcgtcaccacaactcaatagggcactggagagatcaggactggacagccgcactgtg
ccccagggaactgggggaggcagggcaactccttcccccccacctccacccaactcgctg
accacgtggtaccgcagagcggcagacaagcgacgttagtgtcccctgccccagctagga
aaagccgcggcttttccgccagagagcatacgctgggactaacaagtttcgggttgggac
tcatccagccccgaggagtgtccactgatcagtttctgggaaagccagcagggagccgcg
ctgggcgggggagagaaccgggtggagcggaagtgcacaaaccggaagccgtcatctagc
cccgcccacccgctcgcgcggcgccctcctcccatcctgtgggcgtgtctaactcgctct
ctggcttctgtccctgcgagcgctgacgctgctcctcttctggtccccgcagcgccagcc
tcctgtgacgccaatagccgagtccttatccagtctggccgtgggcctcgggggtgggct
gagtgaccagttgcttctcctgtgccttggcctccaagcacttaaattgaacagttttta
gagtttcttcaaactttaaatgtacccatttcttgtgtgaaactattattaatcccctcc
caagctgggggcttccgttgaaaggaaacaacaagaaaataggtcaattagatgtatttg
gaaacgttgagctgtatttatgccttccctctaaactggagagagcgtggaggctttctg
taagaaggctgggataagacaccttagcctagcttgaaaagattaatgtaatttttaatt
ttcttttggattgtcctatccaagtattgcgtcttgaaaggctggacatgaaaagcagct
gagttttagagaatagttaattgtcttaaaaaggccagaaggctaatttaagtgaacaaa
agccaccgccttcaggccaacttgaataaggcgcctttaaataagcggtgtctgagtgtg
ccccacccccacccaggctctgcctgcttttgtcttttttctctttactactgttattag
ttcacttcctaaattcccttttgtctcgactcccctccctattgccacttcctttgtttt
gttttcaacactatcagatctttggctgctttcctgatgattgagctgtcctttttatcc
tgccctttaaatccccacaaacctaaattgcagggttaaagaaaacatgttcataagggt
gtcaaaagacaaagaattttcatatagttgttttgtgtataagtctagaattgggcaaca
tttcatctataaaatgggtgttctgatagacggaggcagaataagttagttttatgaaga
atggagtgctgatgacccgtgaaagagcaaaccgattagacatttcacagtgactgttct
tgtaaggcaggagtggaattctgacagttgacaaaaacaagcagacaaaacccccaaacc
taattggttaacattattttacttcaggtcgcctttagtgttagaatagagagaactgac
tggttcctgttgagaccgaccagtcaggaacttgctccagactcttgggaagatcagttt
agatttggagatgtggaattgatgtaactgattccatttttatattcagttggttgtatt
ctggcctagtacaggccatttaaaaattattctcttatactgtacagaacagtttcccct
ctctccgcttctcccagtctcccctctcccctagatccattgcttctgtttcccttgaga
aaaaaagcaggcctcccagggatatcaacagaacttggcataacaagttacacacaagtt
gcaataagactgGGCACAGACCCTCAGATCAC
Primer
(+)ttcccggagatcagtggagt
(+)gtgatctgagggtctgtgcc


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