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Human element [ hs1457 ]


Position: chr2:85,504,632-85,506,255 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TCF7L1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCTCTAGGTCCCCAAAGTCActgtttaccataggggtccagagaggcaggaaggaccggt
caccaaaactgggaccctttgtgtctgctgatgggcaagtggccaaaaatgggcgagacc
atggggctggagcaaggggcgctttctctgcctactgggcctttcctctagaagcagcgg
aaggcgttctctgggctggagttttctcacctgtgcagtttttggagctgacttgttttc
cttgcatgcaactgtggggagctgtggattctgtaacatgaagctttgtttcctctgttg
cccaggccctgcttaaaggcttttctgtgagaacgtgcgaacagggagaatgtgggcatt
cccccgagccctgtagagtcctgtccacactaagcaagtgtgggacagggtgaggacggc
tggggcggggccctccctaccttctgggagccggagggttaatctccgtagctcattggc
agtcctgcctctgtacagggcatgctgggatttcctcccagctgttttacatcacgaaga
tttgtgtgttggggaaattccagggcacagctgcaattaatctgctccatggctccaatc
aaagcaaggattctgtaggatggattctccgccttcctgcaggaaagggggctctagctc
tctagtgacagcatccttcagagggacccttcccgagatccacgttgagcagaaacagcc
cgcctggccaagtgctcgccccaaggagggctctaaggaggggcccaaaacattgagaaa
gagaggagcagagcccctctgaataataaagccacaaggacactgatggcaacactcgat
aaagatgtcacccaaagaaaagaaaactttgttcacctttacttaggaatgtaaaagtca
aaaatttaaaacatgactagcattccacaatacagcgtaagaaggaacaaaccaccatga
ccaaatagggcttacctgggaaatgcaaaaatgccttcatgtaagaaaatctattgctat
atatacatctcataaatgagtcaaataagagaaaccacatgaccattttggtaaatgccg
agagaaaaatgcaacaactgctccaatgaaaacaatgtaaaaataggattagaatcatcc
ttccttaatgaggtaaagacatgttttaaaccacagcctcagtctacttaactgtgaacc
acagtagcagaaccccagtccccagaaaagtgtttctcagattcagtgagattggaaaac
tgtgtatctgtcctgtcttagatagtcacaacatatgtaaatcgaagacagtagtacctg
ccgtttgggtttggtgttttcctttctatttttgagcatccaaaagcgggtatttaaccc
atagaaagcaccccagaagtgggagcgatcgctattgccaggccatcagttgcattgatg
ccattcatcaccatttcaatgtgttacattccggtgggcatcccccaggagggaggtggc
tggaccagcccgtgtacacatcttcgctgtgggctgaagcccagccacgacacactggtc
aggagctgggccttgcagagccagttaaatgtagcctagactggGCATGGAGAAACCAGC
AGTT
Primer
(+)GCTCTAGGTCCCCAAAGTCA
(+)AACTGCTGGTTTCTCCATGC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.