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Mouse element [ mm1453 ]


Position: chr5:125,620,436-125,623,127 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Ncor2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGGTCTGAGGCAAATGAGCTgtgccttctggagcccccacaatagcctgagcttggggat
ccttggaagctacatcccagctgcaaccccccacccccaggcctggagaagcccatcctc
tgccctgggcttgctgccgcaggcggctgctgtgagcttccgaagcctttccaactttcc
aatgtttacccctcgcgcgctgccaaggccctgggcaagcctgggccggtggccctcatt
tcaaaccagacagggcgctgagccaagctccacttcagcgggggaggcaggctgggccca
caatgcctgcacctggctcccccccagcccaagctcccaagtccccacgctctgatcccg
tcaccccacggcccgacctacactgtcctactatcccaccaagcactgggtaggcatgct
caaggcaagcacaatgtctgtaccatacatcccctcccagggccaccagccagcacccag
tgcctcacgtcttccggatatcaacaacttttcccgataagataacctactgtcccatgc
acaggaccctgagacacatcctgtctcgggcctctccagccaccccagctggctgacggg
ggccggcaggaaccagggccaccatacctcagacggggctggggcaattccaggggtcct
caggcagtgtcctttgcccacatcctgcaaatcatagccctctggtctgtggcaccatcc
ctagggtctggggatgtgggcacccccagccaggcaacttctcttaccagtgcatggcca
gcaacagcctgagtgggctccacacaacttgcaggaactgccccacgcggcaagcgaggg
ccggcagtgagccagccctggtcagcatgccctgtatccgaggcccgacccacaggcgtc
taggggccagcccttggccagcgacagggccatcctccctccagaccaagcgggcaaggg
gcggccccacacagcagccgcaccccttcccgcgagacttgggctcccaccccgactggg
gaggccctggtggggaccagcagcctgctaggccgcaggcttctgtcctaatgtccccca
aaatcagggcaccagaggcgtgtcagggataccctgcggggtggtgtgacccactgtggg
ccaccaccaagactcaggcccagctctgcgtccgccacccaggcctataaacacggaatt
acataagtccactcttgttccagagccaaaagtaccgagctgctagcagccttggcagtc
gggactaattcctcatcgccatggtaaccctggcgggcttccagccactggggctcaaca
ctgcgaggcctttttatagcttttgagaagccctctccctccttgctgctggcagaggga
cctgggccagccacggcccctcctttaaccatttcctcccagccagccagccctggcgtc
ctccagtcctgcagggccagatggccagaggaaaatgctcccgtccgtcccgaccttccg
atcctaactaaaggaaaccgggcctggggctcagggctcaggtcatcttggtgacaggcc
cacaaaaaggcagagctgaacgcacacagaggccagaagagatggccagatgcttgggca
ggcgtcagcactggctgtgacttgctgggtgactcacatccagcccaacctcctctgggt
gtgggctgtgcatctttctcaaagcaggctggctctgcagctgtggggctttgggccaca
gccctgaggtgttggggcagtggtctccctgatgctgcagtctcttaatacagtccctca
tgttatggtgaacccccaaccataaaattatttttgttgctacttcataactgtaatttt
gctgctgttacacatcataacataaatatctgtgttttcccacggtcttgggcgacccct
gtggaaaggtttgtacccacatgttgagaaccactctgttagggtctcaaatggcttcca
cttcagtacccagaagtcaggtcaacatgatgcaagctttgcaccccgccccctaagcag
gaagcccaggccatacacacagccaaatgtggggccagaatggaaataaggaaggtctgg
aagatggaaagatgaggccagggaggggccaagaggaggagaggaaaaggagacaggcct
ccaacaggggcttcaatcacagccacaatcccgtcatcaggctgaagatgaccagcaatg
ttatgtctgacagctcaaccacgaccatgccaagcagggtgcccggggtaaagccatccc
tagagcacgacagaaagtgacaccccactttccactgtgagcccaggaggaagttatgtg
acccaaaggaagcagtcctagaaaaaaactgccctgggatttgaaccagggtcgtggcgg
tacccacagtgccacaaccagcaagaagccaccagtcaaggatagagaatcatctcagca
gttgagaaaactggctgtgcttgcacgggacctgggttcaactcccagcactcacacggc
ggctcacaactgtaagtccagttccagagtatctgacaccctcacacaggcataaagaca
cgcatggaggcaaaataccaatgcacgtgaaatgaaaataaagaaaaagatttaaaaaaa
gaatattgtaaaatcaataacttgcatactacAACAACGACGACGACGATGA
Primer
(+)gggtctgaggcaaatgagct
(+)tcatcgtcgtcgtcgttgtt


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