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Mouse element [ mm1450 ]


Position: chr19:45,131,971-45,134,332 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Sfxn3 - Kazald1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGCAAACCTGACAGGACCACaactatacacaaaccttttcctaaaactactaagaaagct
aggccagaagcctggagctggctctgcatgtacctgggagagtctgagtcacgagccatt
ttatggtcggtcagtcagggcaactccatgagacatcttcttgaagtaaacagagagata
tacttcagtggttgagtgcttgcctaacatgagcaaaaccctagactcagttttcaatac
agtatcaaaaataaaacaaaaagccgcagccactacaggctttccaaatttgagctttat
aacttgcacgcataagcaaataaccccattcttgattatatatgggacacttaggtggcc
agtttcaatttcattccaccctgccaatcacaccaaggcctccttccaagcctcagaggc
cagggccaattctagcttcttttagcagttaagctttggaatttcgggcacagccttgaa
aagaggtcttgaacttttactgacgaatccatgaaagataaactcgtttgtggaggagcg
aagcaatctgtgcacgacaaaattagtgagaatgttttataacaactacctgtgctctgc
agacaagacttggccttctcaaagactggcaggtcatctgaggagggaggggagctttcc
tgtctttcccttctatttccacaccagtttctcaaacgctgtagagagttagcaataggg
cgtgtcacaagctctcaggacaaatcctagctaggtacacgctctaaacagtcagcgggg
gcgcggtgatcggagaagaagtgggggcaaaacaccacctctaccaggacccctggccta
agggccagagcaaaacccctttgtttcctaggtaagccaatcagcttcatgctccgccct
cgagacctatcaatcaaagcgaagccacgcctcctttacgtagcctgtccggaaatacta
ccgcccctgatgttgtcctgtcaatcaaaaattaggccggaccccacccacttccgtttt
ccctggcaacggctggctttagcatgccaggcccctttccggccagaactctgagcctgc
ttcctcccttgctcttgatcctggaccgctcaagccgccaaatccccctcctccttctcc
agtttctaaaccctagagccaccgtgcgcccgccctctgacttcctgcccggaaatcccg
aggttttcgaggaatcacgcgaggtctcttgtcttcctctgcccaggatgctgtagactc
ttcatctcccgggccgctttccattctccccagccacccacccaccctcgtcctcgaaat
ctacagtaccgggaccatttcctgaacctcgtggctatgtgccccgtgagaagtagaaag
tgatgtcacagaaagcagaatagctgccttcctacctgcgaggattgatcctgtaccaga
cgggcatccaggcacctagctacatcccctttgttaatcttgtaaccagaagtagcgacc
ttcaggactcgggttccagacggaagccgaaaaacaaaagttttattttctgagcgctca
gggaggcggccagtgctgggtctgaacctcctgcgtcccagataagagactgtattgcat
ttctaaagggcgaaactgcaagagaggcgaggcttgggtgagcagcagtgttctttaata
atattttgactttgtggggaaagcaagggagtacccgttggagactgggccgtatccagg
gcacctggcttcaaggtccttaattcattctcctagatattaagtctggagttcagtgaa
acggagacaaaaagcaaaaacaaacaaaaagaggtggtctgctgcttgtagttaggacac
aactggcaaattggctgtatatttttacaacttaaacaccttggtttagataacagcaat
ttctatattctcttctggttaacagagaaaacatttggaaaagtgggatagaagtttgtc
cctaggcctgggaacttgaacttgtttgatccagccagcaagatggagttgttcctaaga
tgtctggattcagacaactgtttaccatagaagctgttcagctctattgtagtccccagc
tctcttagggtctgggatctagaatttagtttctccctattgattaaaaggtaccaagga
ctagcctctgcttagagaaaagttcctgagagaggtgtttgggagcggggcaaaactaac
gactcaaaagtcaaatcatgggtccaaacagacagcctgtgttctgcttgagacagcttt
tcagattgctgtgtttgtgtgtgtgtgtgttttctgcctgagcctggacctaaactccct
ctGTCCCAGGCAGACCTTGATC
Primer
(+)agcaaacctgacaggaccac
(+)gatcaaggtctgcctgggac


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