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Mouse element [ mm1426 ]


Position: chr10:21,340,507-21,343,330 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 1700020N01Rik - Gm5420

Timepoints:
e11.5

Published in: Sheth R, Barozzi I, Langlais D, Osterwalder M, Nemec S, Carlson HL, Stadler HS, Visel A, Drouin J, Kmita M. Distal Limb Patterning Requires Modulation of cis-Regulatory Activities by HOX13. Cell Rep. 2016. PubMed PMID: 27974206.

Expression Pattern
limb (4 out of 5 embryos) 

Embryo 1


Embryo 2


Embryo 3


Embryo 4


Fasta sequence
CAACAGTGTAAGAGGAGGAGCATctacctgggggctggcttgccgggacagcttgaagtc
atggaccattcttaggcttgtctggctagaaatcaagtgactttagggaagacactgatt
gtcaggagaaaatagagaatcagagcaacgtaacactgacataaattttccactcatgaa
cttttggggaatacattcaagccataaaaaggtcttgatcttcaagtcttaagagagaaa
aaaaaaactttttttttaaactaagaaggtactaaaagcttaaggagctgaagagttttg
attaatcattaaggagtgtgggttcaaatctaaatatggcctgccttccaggcaatgata
gtgtactaagatctgtttcttagccttgataaatgagacttatataaaattttgcaatta
gagacagctggctgaagggtaccctagaccatctgtctcttctctgaaatgtctgagcaa
tcatttcacaataaaaagctagagacttgggatgtagcttagctgtagaacatttgcctt
gtgtattcaaggccttgggttcaaccctcgttcctaccaaaaccaatcaatagctattaa
agaagtacacataaaactcagtgccagagcctctaagtatacatcacagggccggtgagc
atgatttttcctgacgatcagcagacagagatgccatttgaatttcgtgggagggaggca
cagagagctggctcagtgaccctgacagaatgtggcacacaagctccctgaggatgacat
cttcctgcctctgttggtgactactgagtctctagcttctgggaccattagtactgggtg
caaatagcccttcattgtctagatggataaatgctactgtaggaacgggagtgcaggttc
tacatgttatttatctctttgctcacatttttctctattttccaggaactcgagtttatc
catcatggccgtatttgctccagaaagataaacatatgacctcgggcccatccatcaata
tttagagaaggaattgagaagacttcatagaggaaattaaattctgctgaggaagtgaaa
gatctgtcttcatttatataaggcgccagtattcttcacaagctctccagtaaagctctg
atttcccatttaaatgagaaaccatacaactctgtttagaaatctcttcccctgaacagt
ctcctaactctttagtgagggagaaaggtagcaataaggtccatttatagagctctctga
tggtctggcattacggtaaacaatgaggtgcattattttcttcatgttttcccagcagcc
tccacagttattagctctgttttataagtcaagaaaatgagactcggaatggttctgtgc
cttgtggtcctataaccaaaatgctggggagctacagtttgaacacaatctgattctcaa
accttaactctgaaatgtttccctaataaggtgcaatctgtatgccgtctgctccattgt
ctgcacgtacaggtctgagttgtggttagtgcttattactgtaggggaatcaccactacg
atccacacgtggggaggttcccgtgctcaaatgtccttttgtgaccctttgtattcagcc
cctgacaactactgcttagctttcttggcccaaatataacataaagattataaagtatgt
gtggactctgtcttattttagttcaatagagcgtctgtctgggaactgcatccatagcat
tgtgtgcatcagcaattctttctttcccatcctcagcagcagtccattgtgctggtatta
gtgaatatggtgacattcactaaataaagaaaggttgggttatttctagcttcaagcaga
agtggtggtgggtgcatagctttattactcctgggtcagattatgagttggttgctggtt
tatatagaaaggatacatttgactttgtaagaatcctgaacttgcgaatgctttagtggt
ttgagtcattttcctgtaactgttcgtgaaggaaccagtcaggcaagttaaaggcagaaa
gattgaaagctgaacataggtctggctacaaatccagtatcttgccatactgtactttga
tctaaaggctaataatagaatagaattaatagagtatagaaaaggtcacttctgcaggac
aggtcccttcatgggagatcctacatggtgtgtgttgacagctgttctcttcctgtcatt
ttataagttataaaatagcagtttggagatgatcagtaaatagcccagagtaaaaacaga
aaggacaaagctgtggagatctacttcaatagtaaggcgaagatatatgtgagctaaaca
tacaaaatgatttgtttaaaacttagagaaataaggcaacaacaatgaaaattatcaatg
aacaactcaggaagcattgctgctgctctcagtacagagtcctgcatgttttcaggaggt
gttaggggctaaggagaaaaactagattctgtttttattgcatttcagtggtggataagg
cttaatgcttactgtacctccattacttccacgtttttgcggggtgcaccttttccaggt
cttgtggtaccctgcagagactacttaatcaggcttcaccctgccaggtctaaaagatcc
agatgtcttccagtagactcttccctctgaggatttctcctgatgaagaaactgtgaagt
ctccacctagcttctgttaaaggggctgaacatcccacccagtgtgtgtcctttgtgctt
tcaaatgcacctggacacagtgccagcctggacacaccaccCTCTCCTTGGTCTGAGTTG
AAGA
Primer
(+)CAACAGTGTAAGAGGAGGAGCAT
(+)TCTTCAACTCAGACCAAGGAGAG


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