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Mouse element [ mm142 ]


Position: chr11:95,217,123-95,219,510 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Fam117a(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGCATGGAGAGAAACCAGGAtccttgtagcgctgtgctgcttcgcggtgagcatgcatag
cttttggctttgtgttccctcagctggatgttcttatttcctatagcatatttgtcatga
gggctattttctctttaaaagaggggatgggagaaggcttcaaagtctgatggcatgaga
aagtgactcatgccttgtttgttgaaccagctagttgttgagttttttgctgggtgtaaa
attatgtctccattttggagatgtactaggaaggctaggcacatgctgtcggtgggatta
agagcatcttcccatcccaggttcctccctcctacctggcctgcaagacagcgaaacgat
gaacttgtccctccaggtgcccaacccgaaggcttgggtctgagctgattgctctctccc
ctggccaagctgagaagaaccagagatgtctcacgccctacattatctatagtcttcatc
ctgaggactctcacctctccttcgagttcctatgccagggttaggcttgagttgatttca
aaggagaggtcttagggggaggcagagacgaactggtggcccttctgaaagcacctttgc
tgggggtgggtgtgggtatcccctgccagtgtgcctggtgtcagatagctggcattgatg
gagcagtggcatcagctctcccctctactcccctgccagtagcttcttgtcttactcctc
tcccatcagcagagactatcagcgcgttgatgctcagtgggcactcatacctacttacca
aaggcgttatctgccgtgtgtgcagttggctccgttgacaccacctgactgctgggcctc
tcctctcttagcccctctccctggagccataacaagtgtagcagttgggagacagggcca
agtggctctggaagatagcacctaaggcttcttatctagtaggtgctgttttgttttgtt
ttctccatttgctgttgcccaagaaccaaagcatccgccactgctcagctgtgtggtgaa
atggtctggcctggtgccagggtgcctcgccaggtggctgagctgtggaggctgctgcat
gcgatgggccgataataccccatggtgctgtaaacaggacaccccaccctcctgcagaca
cccagcccatgccccagtgctggctgctttgtcattgcctgtcatgatactggcttgtct
tctctgatacaggagccgattgttctgtttctctcccaggttcccaaatctgagaggggc
gctttccagaaataaaaccagttcatctttcagccacaagcaaccgttttgacttctcaa
cacttcctatcctttagctgtaatcacacgagtgcaggacagcgcccattccccacatct
ttccggtatgcccataagcacccacttccccctcacttgtgggtctgctaggggatgctt
gtgagccgcggagcttaagcccttgctcatcaacagctgccaatgcccaagtctctaaga
agctttattgacttttgtttgtttgagacaagggatcaccctgtagccaaggctggcctg
gaactcctgttcctaatgcctctgccttccatgtgctgggactacaggcacgtatccctt
gcctactcctttccgcacacttctctcagacagacagtatccaggagagcagtaggctgt
ccctagtaaaggacagtgaatatacagtaaattcaagtaccttgccaggcctggtggaca
ggcctgtaatcacaactactgaggaggctagggcagaagaaatggaaaggcaaggcttcc
ctagactaaagattgaattcaagaataccctgggcaaggtagggagaccctgtcccaaaa
taaaaagtaaagagagggctggggccatagctcaggagtagagtgcttgcctggtgtgtg
tgaggccctaggttcaatccccaggcctgtgatacacctgtagaaccttcttgcaacaga
cttctcagtagtcgtctctttctccacctccttccctgtatcttcctcgggaataaaagc
atatttgcatttcttttctcttcagaatccctaggaggcaaggtggaccagattgggccc
tgctggcagagggaaggcagatccgtgaagatggtagtgttggctgcagtcacactgcag
tgaggataggactgtcagacctatgctgtttggatagcccctcctaggtatcagcactgt
gcctgctagtctgcagcctctttaaggatggcacaggatagcatcgctatctggttttgg
ctttggtttgtccttaggggaaattgatgccttgggttagcagctcccactcagttttgg
tgcctaaaacaacaggtgcttgccaaacCATTTTGGGGGATGCAGTAG
Primer
(+)AGCATGGAGAGAAACCAGGA
(+)CTACTGCATCCCCCAAAATG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.