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Mouse element [ mm1417 ]


Position: chr15:102,789,322-102,791,523 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Hoxc11 - Hoxc10

Timepoints:
e11.5

Published in: Sheth R, Barozzi I, Langlais D, Osterwalder M, Nemec S, Carlson HL, Stadler HS, Visel A, Drouin J, Kmita M. Distal Limb Patterning Requires Modulation of cis-Regulatory Activities by HOX13. Cell Rep. 2016. PubMed PMID: 27974206.

Expression Pattern
limb (5 out of 5 embryos) 
tail (5 out of 5 embryos) 

Embryo 1


Embryo 2


Embryo 4


Embryo 5


Fasta sequence
TTTGCCAACTTGGGAGTATTGtgactcaaaagcttttgcatactcacaaacattttaata
ttcaaggtgtcatccttctgtgtgctcatgaggaggaatatagtttgtgtacatttgtct
gcatggaacaaatgtgacgtgatgtgcccacttatgtccttcgtctctggtgtctgaaca
gtcagtatttaatgaatgtaaacaggaattcaactgagggttttctgtgtatttgtgtat
gggggcatttcttgagatgggatatttatctactatatttagctatatcaaggactgtta
tcatgctggccatattttctatataaaaatagacaagaatagaacaaactatttaaaaag
gagactattaacctccaaaggactgcctattttggagaaagatatttagaacaggcagtt
atcactgttctaaaagatacaagctcagaaaagaatctctcttccagaagatatttctgg
tgaatgagaggaaagttatcatgaaagaaaatcaaaggtttgtgtgatttgagtccaaga
accggccagggtgtggtgacagagagagagagagagagagagagagagagagagagagag
agagacagagagagacagagagagacagagagagacagagaaacagagacatagagagag
agggagagagggggaaagggagagagggaggaaggaatgagaggagagaaaaggagagaa
gaaagggaagggtgtctagtccccaagcaaacccaccttcatactccttggatgtccaac
ccccccttgctagcaggggcactctgggctcaaccccttggggtaatcccctccagccgc
aacgctgccctggaacaaaagatcgcagtctagacgccgccataaagcgtccctgagcct
ctaaacccagtttcatttcacccttaacgacccagtctggcctgtgttagaaaatgcttc
cgtcctaaacagtaaacaaacccccagtggatggtcttggctcttccaacacaccccagg
cgcccccaccccatcatgcctttgccccacattttccctcctttcctcctgcctttctca
gctccccacccccacccccaagtaaataaaccagaggccgagttcaaagtttcctggagc
taaggaggaatgttggttgtaaaaatccaagtttatagcgcacgtgggagtttacaaggg
tattaagtggtgtgggctgagagagctctctgggccccaccccctttccactgtgggctt
tgggggtgcaggggagtcaggggcgcttgaaatgagaaattggctgaaagtaggcttgga
tttggagtttctttgtcactcagaccctaggtggcttgggaaatgcaaagcagaggtgcc
ttgaaggtgggcctcccaccccaactctgagggaaagcccctgggttcaggactcccaga
atgaaagactggaaagctcttcaaggaggcggtgggctggggagaaagcacgaatggcgg
cggcggcggcggcagcgcagcccaggtgccagagagtgaagagagctggagttaccctgt
acagttaacctgaagggaaggaactaccttgagcccatttctcgagaagctgacagaaga
gaggactttgctcaagaaggcaaaggaaaaactttgaacttcaagggagtcaagggcact
gcctcttcctccctcaccccaatcctcccgcccctcataggaatctgtagtcaatttctt
tccaggacaatattccctgaagtgggtagccctggggttttcctggtgccctggggatgg
ataacgctgtttactaaacccttcctgctctgagctggccagtatagtgtgcacgcgact
acactctttattattcatataaacctttagaaaaggcaacgccctggaagtttttataac
tttgtttggcataaaatttttacaagattcttcccgcccccctccttgaagaaaaaaaaa
gtttagtttaggtcttgccacgggatagaattctagagaaggagagaaggttgagccctg
aggcttaatcatatctggaaaaaaaaaaagttaaaaaaaaaaaaggggggcttgaaagtc
aggccaatccttcttgaggtctattcaggacctggttttggagacagccagctaacagaa
gccacaggcattcaggaaagcCCTATCCACCATGCAAGTTGT
Primer
(+)tttgccaacttgggagtattg
(+)acaacttgcatggtggatagg


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