Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm1414 ]


Position: chr13:71,870,982-71,873,154 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 8030423J24Rik - Irx1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCATGTGGTAATGTTCCAGAGAgagaggtgctgactctgaagcttgcttagatttggctt
tgtaaataagccatgacctttaatgactgtaatgaatgcttctcaattcacagggtgatg
aatcctagggtggagcactcagggccgataggtctggccgcccgagggctcccagaactt
gttctgagtccatgtacaaagtgcacaatgggcagccacatttgcctgaaagaagttggc
agggtccttcaatggcctccaggcttgtgggcaaaaggtacaggccaactgcacagcgct
ctgagtgaccataagttagtatccactccacatctgtccagaaacccagaacagacaagt
cctaggtaggagctgcactggtatgaaaatggagtctgacagtcccttccacaacaaagc
ccaattctgggctagaacatggaaggtccacaacctggattaggagtggtgttcctttat
atgaatgggtggaaactcggcagagccagcactaatctgagactcccaaaagggataaaa
aaggaagcatgggagtcctatgtggaggaaggactctgctgtctctttaattcctttata
gatgtctctttgagcaaatggtgacaggagatgaatatggacgtgcccagggcttctctt
ttcatttgttactgggctgtcctggctgaaggaggcaagcagctattgcatacacaggca
gacagactctgctcgtatgtcttttacttctcgatgcctcctattttaaaggtcaaatac
ccagggctgaaatgctggcagcaaccaacaagcaaaaagcaacaaataacgtctttgaca
caagggaggaagcagttgaacccgtgtcacaccatgtccccatcggagtggcaccaggca
gcagccgttaacagctgttatataaacacgatggaatgctctcactctctgctccatgca
gtggaaaaaggcgggtcattagccactggggatgcccggtgcccatgcagctctccagct
gtggtgcaagtgtgtttgaataaaaccttagccctcataacgggaagcttgacagagtgt
taacagtcctcagctccaggccgagctgttaaccaacaaagtcgtcattaactgctggta
ataagtgtgtttggggggattattgcttaattacgaatgagagagccaaggctgggcctc
ggacagtgaagtagtttgcttggaagctgtttaaccgcagccttctttgtcatagtctgt
ctctaccactggaagctatagaagggtctggaggaatcccagcacagtcaggcacttcac
acaactccagtttgttctaagcgcccccccaccccctttgtgggcattaaacaagaatgg
tagagctcaaggcagcaaagtgacatctcagaactgttgattcatcagaaacagaagtga
gtcgctatggtggggagactctgcatcccaaacacagtcaggaaacatcccttcacacac
aagtgacatttacacacgctcacacatacatgcacctacacagatgtttatatctgtgtg
catactcgcacacaaatgtacacatacatattacatacacattcacctgtatcttgctga
gaatttcagtggtgtttgaggaccctaaatattaaggttcgttttcatcatgtccccatg
tcgggaaggcaggtgttaaaggtcactgaagctcaaagcatgctgagaacaacactgtaa
tttcccctgagttacaccttagacttagcttcccggttagcttggcatgaggcacctgtt
ccatcgcattgtaatgacattcatgcctctgctactgccttctatggaagtccttgggca
aggaccagccctctgtctatatgggaagaggagggggcttgtgtgaacttcagtgaatca
gcaatttaattcatagctgttcagccactctgctgacctgaggattttaatgaacctgcc
tggcatagccagtgtcacaaggaaaagaaaatagccagaaggcatgcataaatttctgtc
catgaaaatataattaactacttagttatttggtaattcacatgtataatttatatattt
ttgcctatgttggggcttgaacccagggccttacacatgttggcaatgggcTCTCCTACT
GAGCACTATGGCA
Primer
(+)ccatgtggtaatgttccagaga
(+)tgccatagtgctcagtaggaga


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.