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Mouse element [ mm1405 ]


Position: chr7:141,869,653-141,872,185 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Dock1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTCGTGTTTTCGTGGAAGGGtagttgttcagtctgaaggaacagcagggagggggtgggg
cagtgtgactggccagccttgcaagattagcagtgtgtaactgagctgtgggccactcat
ccacacgattgcgtttgcaattgtttcagtgtgctgggaagctcttgggtgacttgctgc
actagtttgctttctgttgctgtgaccaaaagcaacttggggaggaaagagttaaggtgg
cttacaggttacagtccatcatccagggaaactgaagcaggaaaacaattagctggcctt
gctcagctacttttcttagatagtccaggcccacctacctagggacagcactgcccacag
aggtatgagccctctcacatcaaccagccatcaagtaagtgccctgtagatgtgccacag
gccagcctggtggatgcagtttctcaagtgaggttccctcttcctaggcgtatgtagggt
tgtgtcaagttgagaaccgctaaccagcaaagagaggaggtgcacaccagagttggcttt
tagctctgacaggttgccgtcaagcaccatcaggtgccacccccatgcacacagcttcct
catgaaaccttgacatcttcaagatggagatgccgcaggtgactggggcaagcctccgag
ccttttcccagcctcctttgcacctctcccaaaagcggggagaacgcttgttgatgtggg
gttcagaggagctaatgctctctgtaaggcagcttggaagcacagctgtggatttgctcc
tgctaacatgggcagctcttggggctgtcatgaagacccacgtgcacaggacgtgtatta
gtttagcggggctgctatgaccaagcccctgtctggctggcagactgtcatcttcacctc
atcttactctgctgtgtgtgccctaacctctcctcctttaaacaaatgagtccagaccta
ttgaattggggcttttattgaaaaccttgtttgagtccagccacccaatgactggcctcg
ctgtcccctctaccccaagttccatcctggggctctgtggtcgttcgagtgagtctgtcc
ccgtagtggtgctccttggggacgctcaggatgtgtggccctgctggatgaagcgtctga
ggtgggcttggagagcagaggcttcttttttcttcttgtttgttccctctgctttttgtt
tgtgattgaagatgtgatctcccagcttgctcttgtctgctcctagctgccatgtctgcc
tgctgccacgccaccctgccatttgggggatagactctcgtctctctggaaccacaagcc
caaataaactcttccttctctaagttgtcttggtcatattttatcacagcaacagaaaag
agcataataggtttaaagtgagattgtaactccagcgttcagatgttcaggctcccgacc
cagccctcagcagtgtaccttaagactcagctgagtttcctttgtcttcatggcccctgg
gctttgttttgttctttcctgtaaggttcccggagggatgtggcagatgaaatgtccttg
ggtcagcctggaagtcagcagcagagtttgtgccagaacaatgcgctcgctcaggcagtt
ttagacctgaatgtgagcagtatttggtgctgttgtttttctcaagcctcactgggcctg
ggcgctcacacaccctgctcagattcatttcccggttctcagaaggtgtgtttttgtgac
aggagccagctgcactgtgcttcctgaatcccagctctgcagcagtgacagggatggcct
ttggtgctgggactgcacctttgctactgtccgtggactgcacactgtctgttccaggga
ctgccttacgtactgcactgggagcctagcttctctcccctaggcaaactcacaaggctc
tcagtgatgtggcaccacggagtcacaggggagctaaaggggcagggaagggactggcct
tgggacaaataaatgcctccaattttgtgataattttgaagccgtgctggctctgtgcct
accaagtaagtcaccacagctgcacccaagagggaatctgggtacaagcacactggcacc
ctccgccttcagcaggcaggtgggagagcaagttacattttctcgtgggtgcctgtggtg
cttagcatgtggtggaggacattaagcacgctcacttttggaggcacagagagccttgtt
gtggatttattcattttttttggtagttgccttttgagacaaagttttagtttgtagtct
gctgccctagacctcactgtgccacctaggccagcctcacaatctcctaagtagctgaag
atgaccttgaactcccgaccctcaggcctccacttcccgagtgctgcaaacacaggtgtt
cttccccacacctgttttgatgttgttgtttgtttgtttagtcattgttttgtagctttg
gcagcttctctcaggagagtgagaggtgaaactgggtgagctttagagagtatTACTGAG
TTGGCCTGAGTGG
Primer
(+)TTCGTGTTTTCGTGGAAGGG
(+)CCACTCAGGCCAACTCAGTA


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