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Human element [ hs1401 ]


Position: chr7:108,014,729-108,017,176 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NRCAM(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AAGACTTGATGAGGAACAACTGAtaactgaacaaaatctagtgtgtacactcaaaatgtg
ttacgaatagtttggtatagtgtatcatttcaatgaccaaattatcatctcataaaaccc
caagcaaagcacctaaggtttaatgtagtaatacctggagcaagaggaagactctacctg
aatattataattaatgttctgttcccagaatgaacaacaggccatctgaattcattatgg
agtactctcttaatgaggctcatttctgcgttttctcaaattagtgtaagaaattaagca
tatgtagaaagatgatgaattcaaatatgaagtgagatttcaattcaacaaacactgagc
tatgagtaggatgctgtgctaaatactgtggtttcacagatgaaacaaatcccttgctcc
aaatgcaaggtaagtccacaagcaaagatatgccatgtgatgaaacaggtgccataatag
aaacagaaatcagagcacagtatgggtatgcgtaggctcatgatcaatgattagggagag
ctcaaagaaagtatgggttccaaagagagtacaaataataattttcctgctcagcagtac
ttgtaggcaggagatgctttcttcttgttttgttccttactgattagcaataatgaaact
ctgcagctttagatataaaatatttattgagagtcagtacatggaatagcacagatgtca
tgaattaaatacattattgagaacacaaagtatcagaaagctagaaggctagccacccag
cccagactgtctgtctcagtaaggttagattagtttcagtaaagatataacaagtcctct
gattttgactgaggagcccctatctagcagcacatatagctatatatgtgcctatttcct
ccttgtagtccatgagctacttgaaggcaataactacattatgcagcagagtgcatggca
tttagaatgtgttcagtatttgaatactgaatgaatcaatgaataattctatactgaaag
caccactctctcccccaaaaataattaataatgatttttaaagcccttcaaggtcttcta
cagcccttcaaggatctgtcacaacttctaggaatcaggacattcatccgcgtgatggat
gtaagtgaaaggtccactgccaatgttagcacatttcctagttgtttgacctttaagaat
ttaagactactcaggaaaagcctggaaataaaaggatcatagtcttcaagatactcatga
agtcaccacttcattctaacataagcactgcctacagaaaaagaaaagacatgagagata
ataatggaacagctgtaaaatctctttctggagacaactaatcaagctatagctcatctt
gggttctatgttaatcttatatacagccaaagcaagtatacggaaattagttaaccccat
gaatatcactatttttattccattgtcctccaaacaaattttttcactgcatttgatatg
tacaaacatgtgaagtttaaaaaatgtcatctgtccagtctcttgtagaggaaataatgt
gaactgaaatagctaaaggacaaaagaagtaagaggaagagaaacatacctgaaagaatc
taagttactgacaaacccccaggaacatttcaatatgactgtattagccagacctatgat
agaggactagtttggttttgatattaaattgccattgtccaaactccagtgatccacagt
taacctgagatggacacctgttggtgtttggttgtttaagacttaggcctggtttctaag
cacatcacaaatttctttctgggagttacttcaactttggatataatctggagaggccct
gaatccagttccctgactttttccagccaaggggcagccatgtgatcccagcttggtcaa
ttaaatacctgcctggaatttaaatcctgagcagagtgcctaagagactaaaatggctgg
ggttcatccatttcatcactgtcatcctgaccagctggctcctgctgcaagagaacacct
gttgttcctgcttcctgctctctggaggtaacctggttcctgaccatgttcacatctggt
cccatagtcatcttgtaagttctatgctctcctagtggccttctaataaactgcctttcc
tttaagttacttaggcttttttggatatgtgcagggcaggtgtggctggtacttgctgcc
ctcctgagaagagttagtgtaaggggttacagcagaggttcctgttctcatgttacttta
aaacctggcagcctgagtctaccaatgagcatctgtaaaccatgctggggtatgcctgcc
taattctcttttcctattttccttttctatctctctcccaagtaaggcccagttaaagaa
gaatgctaggcaaggacagtatgggaaaACTGGGGAAAAGACCACCTT
Primer
(+)aagacttgatgaggaacaactga
(+)aaggtggtcttttccccagt


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