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Mouse element [ mm14 ]


Position: chr13:59,191,545-59,195,519 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Ntrk2 - Agtpbp1

Timepoints:
e11.5

Expression Pattern
forebrain (5 out of 6 embryos) 
hindbrain (rhombencephalon) (5 out of 6 embryos) 
midbrain (mesencephalon) (5 out of 6 embryos) 

Embryo 1

Embryo 2

Embryo 3

Fasta sequence
tcatAACACCCATGAAAGGACACCtcaaaataattttacgcagaaaatacaatttagaca
aatgctcttctcaattaaatgagttacacaagtaatagtagtaaaatatctaaagctgtg
gttaaactccttgcaagactggctgattggcacatgccacatcctatctctccgatcagt
caggaagagctctaggtgacagctttagctgttctgggttacagcatcgattgagttatg
tagatcagacacctcttcaaccttggggagtccaatgtcaaggtgtccacagctgcatca
acccacagcccaaggtcttagcgtgaggccagatgagggaaagccagtctacagaaccca
ttctcatgccccacaccacagcagcagtgtacgtgggcttctgagggctgaacccccaca
atgcaatcaccccttaaagattctgaccaccttgccttgaggaacaagttcccagtgtgt
gagttttggggccttgcaaccataaccaaagtcacctaccctaattcttgtttttaaaac
ctatagaagacacggggaaatagcttcttaatcccttgtcccatggttattgttgcctct
ttaagctgttactttttgaaaatgttttcttctttgtagtcttctttgaaaatccttttt
cccccttttggtataattgcctcaacttttggggttttttcccccctttctttgacgtta
tgtatgtccgtccgtttattacttactctcattctttgtagttttaaattagcacatatt
aattgtagaaaataactggtttcattgtaacatttctgtacctgttcataaagcccacgg
atcccatccagtcactgtcacctgtccctcctcttctctgtccttcttcctcatgaccct
catcctgcattcacattctttttagaaaaaaaatctagattccataagctttctttaaag
gagactatctttgatctcctgagaagtttccaaaacccaggccaccctgtgctcttatac
ccagagaacatggtagttaggaagttggttgttaatggcaaccccagatcggtggtgtgg
cttgtgtttctgtcatctgttccttgcttagttgacgcagccttatccacgtgcttccag
gctagtcctgagactggttgagatgctgtctgtgtgcaaaccgtaccagaaacaggaagt
catctgggaagatatggagttgctattccctctgatggcccctagcagaagggaaatgaa
cacgttagctcatttcgctgttactccggcctctcagcctctcgttcagaatgcttcgct
ccctgcctgctgtctctagcctgccctctgcattggatactgttgaaaaggagcagaggg
aggccttgtcagaagtctcacagggagccaggccttgagaggcaagcatgtcaccaagct
tttgtgtgaaaaatgacatcagggagaaaaaggtgaatgtgacattgtttgtctcttggt
caataggaacaaatgaggcttttctcagcgtggcccgtgtcctctgaaaaccaattgctt
ctgttttgtgtagttggatccctcctccagccccaagcactctcgctctcagggctccct
gacttgggttgtgagtgagctgccagcctcagcttgttttgcgagttgtcaagggcaaat
aaaggcctgtagtctgtgtctatagctttgagtgctgaggactgtcagggcctttgtggt
tctcctttatagagtcctgcttggtcccaaagaaagcatttgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtaagtggtgtttgctttggttttaagaactaagt
atccctttgacactctgagcaccagctacttaacactagggcagttcagaaaagatgcca
tgagatcacggcacaaaaagctcaaactcctttagaaacaggggggacaagtgttttgaa
cgagaggcctgagtaacagagaaatgaactaatgtgtgtggaggagactattgtgggact
cctccgaataagagggcatcaccagactccctctgtctatgactgacgtgtcctattatg
ggaggtaccccgagtgctttggttggacatctttctccaaagcagcatcaaacagttctg
agtcaaactggggcaggttgagttcatccgcacacctggataggccctgccctctctgcc
tagcaatatggctgggaagtgcacccattgattcaccccaccccacccctacagtaatca
aatggctttggtgatcaagttaacctttttctcatcattgtccctgaggacataggtcaa
atcttaacaagagcactgcagacttgctccatattttgtgctgggtcccttggttctgtg
ctgggatcctctgggcatggggctgtgctcctgaacacactggtgattggaaggcccgga
gcatctcaccaggccctatctccataggattatgagtccttgcacatttctttatacccc
agcgtcttcagccacaaaagcattgttctcaattgtatcactcccaagacccgctctttt
cttccctcccttttcagaccctttggaaattcggcagtgaaattttcctccccacatctc
tgtggtgagttctcccagctttggaaggcttggttgccatggcagcgagcctcctctgcc
cagagccagactgaggggattggtggtagtggggcgggcagggagaggcgagaagtcatt
aaagtctgtcaattagcatgcagcaccacagccccttacagcttccctcactggagagca
gctgtgcgcctcaggtccctgccagtgagaccctccctctggagcccagggcagggctct
ctgcaccagcccatgcacctgatccagacctacacagcctgggccagccaggctcctgct
gacacctcccataaatgcctctcctcctccaagctcctgtccttggatgctcaccttcgt
gaaaacagagcaggatgaaatcacaccagtggtgggggcttggaacatgaagcagcagcg
ggatctatccttgggggaagggtgggggctctcagagttagttatttttcacggtcacct
gccatctaccaactgccgcaaaggccagaaaacacagcacgtcaggtgtactgttggaaa
gaggaaatgcaccgaacttcacaggcatcagtgaggtagattctcatgcccagataaagt
ctgcttcttgagatccagggaaattcaggaagtaggctggtggaaatggcagcgagtcag
agctgtagttcagagacccaggagtcagcagcttcatctgtgaaatgggcttgctaagcg
tatcccccccaaagaccctgactggagtggggtgggcacttctcaagttcaccgggaagt
ggagtagagaatggaattgaagctgccatccattttctgctccagtgccgtagataaaaa
tccagaaagcattgggatgacaaacaccgcccaatctgacctgggctgaggaattctgtg
tgtgtgtgtgggggggggggggtgtctccaagcctagcttcaccttcagtgcattctctt
tgccaatgcacacaaaccactctgagctccatacacatctcaaacacactgccacagggc
ctttgcacatgctgcagtctgcctggaatgactttcttctttttggttaattacttttta
gttgttgttgttgttgttgtttggataacaagccccaacctctaactaatcttccagccc
agaacagattattccatcatatctaagatattgtctgtggaaattaaaaatatcttcccg
catactggtaattattaatcttctgaactcacttcctttggccactacagtgttatcttc
accatgccggcccctccagggataaaactgctgctgacagaatctgtatccatgtTTTGG
TTAGCTGGTGCCTGT
Primer
(+)CACCAACACCCATGAAAGGACACC
(+)ACAGGCACCAGCTAACCAAA


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