Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1399 ]


Position: chr5:111,183,563-111,185,323 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NREP - NREP-AS1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCAAGTCTGAAGGGAAATGGtacatgtcttctttctagttcttctgttccaaaatattcc
tggaggatctttggtgtagttatttcaacattgccaaagattcaagaccacgcaggacct
aggaaaggctcttgcctcaggtatgcatgaccctgagcttcagtaaaactcaactggtgg
gtcctgaaggtttggtcctatccaaatatctccattgaagagaacagtacaaatactcta
agctaatacatgtctgatttatggtcttgggtatcaatttggtattgtgtccaaatactg
gtgacaagaagaatataatcaaacattcttgattcttagtttgatataaatttaaaagtt
agtaagttctttctttcacatcaactatttttagacacagttggcaggccatatggatat
atttctagttctttatttctagtaaggttttatttaaaaagaaaaacacagactaatgct
aaagctttcaaattagtgcagatttcaatgctagccatttagatgctcacaggatgcttt
tgacactttcatttgcctacatggagagtttttttctctcccagtagcaccttggataca
cacctgcctgtttaaaatcaggcatacaaaagagaaagtgctgatgaatttggtgctgtc
tagacaagtatactacagtgcagtgttgggccagtggttgccatggtaatgcacaaataa
gcttttacagctctgctaaatagtgagttgtggatgcttcctttacgatagacaattccc
cccaacccccccatcccctgccaccttgaaatgtgaattgccaaagacaatctgactaac
tgtaagacatggaaccatggcatccaacgatatttcagtgcgtaagatgaatgccatgct
ttaatgttccttgtcaaagtaattcattttctttgccatttgtcagcagagttacaagtt
cctcattatgtagcagaggagcctgagcctaagaaacagcagtgaatgggcaggaaattt
agtgttttcatttgcttcaataaatgatagctttggggtctttttctcattagagttatg
cctttcttcctttgaactaatagttttggatctcatactcttcactggccctgggttaac
ctctggtgtacaaatttgggtttgagattacctctttgctcaatgagctgatagttttgt
gggtaacacagagaaactgagcactgcaaagcagatttggataagtggtacatgtgacaa
gcagggagcttctggaacacacagatatgaacaaaactcagtcctagaaggacagtgaaa
gcaccctggtagacatggtatctagcctgtaggacgataggaggaatccaagcaaagtgg
tgaaaagcataccaagaagagggaacaggggatgcaaattttcagaggcactagggaaaa
aacacggtgttccagtcagctgaagaaattgagggaggaatgtagagtgtaataggctgt
gtgagggaggagagtaaagagaggtgagtcttcaaaggtaagcagggttatacttatgag
atcttagctatgtttaaagtttggaactttatcttaaaagcactgaggagccaatgaaag
ctttaagcagaggagtaacactttttagaaacttacttctaattgcagtatggacaatga
attggaagacagcaagattggaggcaggaagaagagttacataggcttttttagtagcca
aCAGCTTGTCAAATTCAGGGA
Primer
(+)tcaagtctgaagggaaatgg
(+)tccctgaatttgacaagctg


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.