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Human element [ hs1398 ]


Position: chr9:109,382,587-109,385,126 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC100996590(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCAGCCATTGGGTAGTGAGAtttctgattccaattacaaaagtagtaacattacatttct
ggaattttgttgagtctgcctcctgcgggcttttataaaagtgtagtcagaccacttaaa
agaacagagagctatgatttcatcttgctagatgaactattttttaacctaccagctaat
aaatatggtatattagtaaatgtctgtagacatggcctaaaaaaaaatgagctaaattaa
gtgatcaagagttcctggagcagaagccactttacatcagtcaaggaaggctgctgctag
gaggaggtgctctctcaatagaaggagccagatccagtcggaaggggcacagggtaaatt
ccacgtaggagcatttactgagtaactgcttggtgcaaacataacaccgacggcaatgga
aagacaagaaggaggggaagacaagtatctgccttcaagaacgttacagtttgcagaaga
gttgaaatgagtccactaatgctaaagaaggtagaggctgtaggagaaagcctgaaaaca
ctgagctggaatggagaaaggatctcgcttccccatctcacttggctgcctacttttttt
catcttgctgcttcttctcccttccccctgcaacaatgccagagtttgcccttagcctcc
ccaaggacaatagagaagcagcccttgatgaggctggaggatcctcctgtctgcctccca
gcacacacttgccttgctttgactttgctctatggaaaataaatcacagacactcaattc
ccagtcaccgtccccagggagctgagacctcacctcctccctggagcctgcctgtaacag
gggattgtcaggtacaaagagaaaaccttcagagacccacaccccatttggagagcgaag
agggtcaatgggaataattgctagcagttgaatgtgagcgattgtagagggattggaagg
aaaaggtttcaggaagggaagaaagaaaagaaggggggaaaaaagccctcacccccccac
cccccccaacctccatagtctgtgcacagagaactgcatggtggtctgggtccttgtaga
acatttgtgtgccggacaatagcacagcccggcttcagatcatcagctgctgttttctgg
ttagctctccctttatgtgagtgcacaatgcaagccttcagtcacagtgactcttgagaa
atacatctggttttttctttcagacgctctgaaaaggtcagcctgttcgtttcttagacg
cgagacaccacagatttttttttctccctctgaactggaaagacagacctacaccttttc
ttgcctcctggtacataattagacatggtgcggctctagaagccagctagcccatcctcg
gcactctttcagagacgtgtcgcccagcttcgtggctgccgaacttctgctctgatcaca
aaggctccaaacagtccttcttccccagcccaacaccctggggttctctgcttgttgttt
tgttaattatgacaatgactccccacagcctgctacccaaacatggttcatgaccgatga
tgctgtccctggcagagggaagacttgagaatttctggaggaaaaaaaaaaacaaaaccc
aacaataacaacaacaaaaccccacattttaatcattttcactccagtgatggtaaagat
tcttcatgcacactgtaacataataataaatgtgcccatgaggaaagaatgatcagcagc
tggtgtctgacaaattatctcattccagacaggcaaacagtccacagtggggagaggctg
gagcctgaagaggcaatttggcacacgattggggtttacctctcagatgatggaggttca
aatggcccactgcgtctgggcctgggcctccgaggttttctctggctctcctattctccc
atcacctcctggagctcctgacagccatagaaagagggattattctctgggcttagccag
cccacctcttggccctcctccagggcactcatattccagccataagaagcaattacagtc
cactccccgccaggagtcgtgctctttcatgcgtggtacgtgctgtttcctctcctcata
atgccgtggcgcccacagcgcactcctattctgtgttcaaaacccacctagattccttct
ctccttttgctaacgagtgttagtcactctctcttccggaagcttctagcaccttttctt
agtacttttattaccccactttgtagctatttgttttctgtggactttctgatggcagct
accatgtgtttctaatgaaccttgagtgtaaggtacaatcctgagtgtttttcttctatt
agcttgtttaatcctcctgacccgaacagggaggaactcttcccattttaccatgaggaa
actgaggattaatttattttgcaccacggcccccacatgatccctgaagcggtgaggtgg
aggtagaaaagcacaacttcacctctgctcctgtctcctagcagctggtgggcttactgg
CTTCTCAAGGTTCATCCCCA
Primer
(+)tcagccattgggtagtgaga
(+)tggggatgaaccttgagaag


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