Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs1391 ]


Position: chr6:3,349,397-3,352,257 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: SLC22A23(intragenic)

Timepoints:
e11.5

Expression Pattern
forebrain (7 out of 9 embryos) 
midbrain (mesencephalon) (7 out of 9 embryos) 

Embryo 1


Embryo 2


Embryo 3


Embryo 4


Embryo 5


Embryo 6


Fasta sequence
CACTTCTCCCTGCTCTTCGTtcctccctgccaaagcctgcagaaccctcgaggaagcctg
ccctagccaccaagcagctcagcactgagctggggcttcggactgggcagtcagagcccc
aaacacctttctgtctcctacctgtctttcttcctccccacttcctggggacctaagagg
cagcctctctctccctatcccacctacccgaggactcttcggccaaattgactcctacca
ccaaatcccaatgccaaccccgaggcaagccctgtggcccctggagtttctggaaccctc
tctagaatgtggttcaaccatagggcatcccctgcaggccctgaattattatagtaccaa
aatataccttccttcctcctccacctcctcacagcctagtttgcagttaggctaaccgtc
acagctggcatgagctgttttcatcagattaaaatgcatggcccttcttcccacacacta
ttgtatttctgtttggtgaagaatattgaatactcaaccacccaagtgctttaaatatca
ctgaatctcaggaggtggaagagcagagtggagaagatgaattatttgaactactcagaa
ataagcctaacatgaaagcaggaaattcatatgaagtgggcagtgcctcaagcaacctga
tatcttcaggaaagataaggtggtggcttattgctcccatcgctctctgatcacagacct
gggacagagcacctcttccagggctcttgattcctgtgatacacgaaggcagatgatcac
ggtcgccttcatcccctcttgggggctaagtacattcacagtcccttggttcttggtctt
tgtgtcctttgaagcacataaaagtctggtggatgagtaggaccatggttgatagaaaat
tatttcccagtactgcacagcatagtgactcagcatgcatgcacacacacaccccaaatt
ttcatgaaacgatacttaacccttattgtgtgtgatgcacttaattctatttttttcttt
aaaaatgctgggcaggacccacccgatggattctataacccttaacccaagccctaatgt
gtcataaactacagttttaaaagctgctctaaagtagggttggaaaactatgaccctcgg
gccaaatcctgctgaaggctgctgtttttgtacaatgcactgcctgattttattcagctc
gtccctaagaatggacatttttaaatggttcaagacaaccaaaagatgaataatatctct
tgtgtgaagtttatgtgaaattgaaattttagtgtcgacaaatgcggcttttgtggaatg
cggtcacactcattcacctccagattgtccatggctgctgttgcagtagcagggagtagt
aggtggggcagagaccgtatggcctgcacagcccagaatattcatgttctggccctttgc
agaaaacttggcccatgcctgctctgaagctttgacagctgcaggctggattaactgatc
cattcgtcaaactggttgtcagagccagcatgttttagttatccttcagtttctaacaga
aaaatcagcattattacttaaaaaatgcaaatggtgatttttattatgagagcagattcc
tcaagggagacggagttattttcacatcagagagagaaaacaaatggaatttcttggtgg
taatggggagctggtctcactgcccttctcactcccattctgaggtcaatcatcttgtat
cttcaaagggcacttgaatttttaatcatcttctcttattgacgcatttaatttgtggtg
aaagagaaagatttttttcttaaaaaaaaaaatcccttttgaatttactaacttataatg
gtgagcctgcatttcctccaggagaagcaaggccaggccgatttgaacaaattccactta
aaattcaagaaacccatgtgagatgaaaagtaccctcagaatggccacaaacaaagacct
cataaaaggctaatgccgtttgtatagaattacaggaaagaaagtgagagctagagaggc
cctcgcagttaaagcccccagcttttgtgaggctcaggcaggatggaaaaaaaatctccc
tattagcattctagccggatggccctttgtccagtgtaatcggagtgcggtggaaaatgc
caggcaatttagcctcttagggtggaaaacgaaggggcgaaggaaaagggttggggaaaa
ataatctgatgttatcagctagtgctggcagaaagacaagtcttgagattttatggggtg
ggggtggctgagctgggcaatgaacacaaatcctgggggttgccctgagcgtgccaggca
gcggggaacgttcagcccacaagtactggacggtcaggactaatgagcagtcatccaggc
tcagtcaacagccctctctgtggcttcccgcccacccctcccactgctctggaaacctct
ctcccctcgacctttcctggctttcgcctaagaacacgtcactggccacttcaaagattc
tgtaacccatctcctcccccagccacactgtaccacagggtgggccctatggagccatat
ttctgctatttggtatcaaaactgtccccgaggagacttgctacttcattcaggactgag
ccaggaaacccaggtttctaatgcattctcatcaaatgtacatgacccccaggtgagcag
gaggatgggcagcagggccaaggcctgagctgctgcagtcatggggaccacctcgaggca
gatggagttcccatctaggccacaccaaacaggagagcagggagggatgctctgggtgga
tgactgtccaccacccgactgGTAAGGCTGCTCCGTTTCTG
Primer
(+)cacttctccctgctcttcgt
(+)cagaaacggagcagccttac


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.