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Mouse element [ mm1386 ]


Position: chr6:114,752,658-114,755,344 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Atg7(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCTCCACCTTCGCTCATTGTtttctgcatttatacaaggttgctctctgctctccctctg
gtgccatgtctaaattatccctagattgttcatctcaagtgatacaaagcaaccttgaat
tgtccctggcaaacgcaaacagcagacagctcagattcctcctgctcacggaagggaagc
tcagttcaggagagcaggggtgccaccttttcctccagactggcctctcttgagaggcag
ggacatggcttcctgcaacagtagagcagtcagtatccaggaaggagtggtccatttctt
cttaaaccccacatgccaggatgaggcctgtgacttagtgtatctaaagttaaggaaaag
gcaaattcccagagacagatctgtggccaccagagagcactggcctgtttgaggccttgc
cagtgcccttttgtggtgtggggatggtgatttgccgctcagagggcgaatctgcccatc
agttgagcaatgactgtgtgatttaagttttaggcccaagctgaaaaacagagaccagac
tatgtttgcactgtttgtacagtcagtaaggctttcctaactgttctcccttatccagac
ctccaggtgatctaggctatggttgcctaaatgtgacccactcccatgggtcctagtgcc
tgagaggtgctgggtgctctcagccagcagatagatttctagaatacctcccatttccgt
gaccaccagctgaggcagttactttctaagagtccttcaggtttcctgccaaacctggga
atgccagatggacttgtcattatatagtgtaactaagtacactaagtgaaaaatgaacac
tggaagtcatttatatgaaacccaaattgagtttggaaagatttgatagcagcgagtgtc
tgaattcactgctgtctgggcccatccagagctgtgctctctggagcatattcttgaaat
gggtacttgtgtcttccacagtgggcagtaagatttagctgtaattatatttagggggca
tctggattctagtgagcatttctgggtcagttttagaatctaaagtctgtggtttattcc
taatgtggaagtggagtggtctgcaggcacaagaggaagggcttcaccggccaaccatgg
cgtcgtactgaagaagggctgctgccatcaccagacttcctacactaagcatcaggatta
cagtccattagacgcacaccagcagccagggatttgtgactttctgagttctgaataaga
cagaagtatgttttcccacatcttaattgtgaaccccagaaggagaagtaaagaaagtct
tcagtatattctagaatgcagagctgctggatgctagctcagtgtccgagtcccaggcac
gggagactcgcttggcagtcacataaagcagtcactcctgcccatgtgcacagccacggt
agttatggctttgatgcctggtcagagacaaatgaagctccttggggagtcttctggagg
gttgtgtggagtaatggaaaaagcagagagaggcgcaaggcctgcctgtgtggtgcttgt
gagcgctggcctgtttgaggccttgtcagtgcccttttgtggtgtggggatggtgtttca
ccactcagagggctgtgctaaggacaagtgtgtgaagtttcatccatagggattaaaggt
gtcccctagcttcaccatcaggaccatggcctagagcacactctattgaatttggagact
caggattctgctgtcgtcccacacagagggctttggaacaaaggggctctgttctgcaca
ctttagtttctcaggaaaccgaagagaagctggggaattcttaggagcagggagaaactg
ggcagctccaggttaaattcacttctcagtagctggatgtgcttgactgtctccccagtc
aaccaatgcttttgtattggtttcagttttgtttcttgcagtgtggggatcaaacctagg
ccttcacacacgctctgcctgggttccacctgcgagctaccacctagcctgacgggcagg
gcatctcttcacttcttatttgttttgtacatggatctcatcactatttaacatcatcca
cctacacaaatatcaataattctcaagacagcaaaagttttattttcccaccttacatgc
ttcaagtggtgactaacatattgattgatattttcctcccatttttgacttcttttattc
caaaataatagagactttaacaagattcccttccccagtgtcacagctaaggttctgtac
agtagctgagtaagagactgggcagagacaatctgtttggaaacaccaggattctttcag
ctggctgaagatgctcactctgcctctgatggcacagttagctgtgatgtcacaggactg
atgggcagagggctgacttgctaagccagccagcagggagcatgactttcctccctgctt
accctttgaggtatggctggacagagttcataaaggcctcaggtttccatggctctagga
agatatttagcaaattatttttaaaccatttggagttggtacaaaacaccagaggattct
gtagactctgagtgagttcggaggaaagtggaagctagtggggccacctgcacaccccca
gaggctggctccttctcagcttgccgtCATCCCCACTTCCCAGAACT
Primer
(+)TCTCCACCTTCGCTCATTGT
(+)AGTTCTGGGAAGTGGGGATG


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