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Human element [ hs1385 ]


Position: chr2:3,268,196-3,270,849 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TSSC1(intragenic)

Timepoints:
e11.5

Midbrain staining extends into forebrain/midbrain boundary region.

Expression Pattern
hindbrain (rhombencephalon) (3 out of 5 embryos) 
midbrain (mesencephalon) (4 out of 5 embryos) 

Embryo 1


Embryo 2


Embryo 3


Embryo 4


Fasta sequence
CCCAATCATCTTCAGCTTGCcatgccccagaagaactggataaagactttcctgtgtacg
gcaaataaggaagctccaagcactgctagggaagtgtcaaaggcaggggccagaggaggc
ttcctccgggcaggacagatgaaaaaagggaactgcagtgggtagaagcatcaactatgt
tagccacgtgcgagttcacatgacacaagaagacaacctcacccccattcctttgcaaaa
cactatgaaccaatgctgtttttgtttgtttgtttgtttgtttgttttgagaccgagtct
cgctctgtcacccaggctggagtgaccatctcggctcactgcaacctccgcctcccgggt
tcaagcgattctcctgcctcagcctcctgagtagctgggattactggtgccgccaccatg
cccagctaatttttgtatttttagtagagacggggtttctccatgttggtcaggctggtc
tcgaactcctgaccttgtgatccgccctcctcagcctcccaaagtgctgggattacaggc
ttgagccaccgcacctggccccaatgcatttttctaaaaattggtaactaaaataaaatt
aatgaaatgtctagtgtatgaaaaatttacatagattttccaaaagattataaaattgtc
cttctagaatttagtctgaaaatctggtgggtacgaggtgagttcaaagtgccttaataa
agtatgtgaacaccagaaaccaccctgaggaagaccagaacattagaggggtgtgcaggc
aggaggtgtctctggcatcgtcacccaaaaaaatgaacgaagctgcacacgttgctgagt
aaggagtgtgcttggggctcaggaaatacagttggcattcctacctccagaaactccaca
tcctcagaggcagatgaaatggaaggtaaacagcactaaggaagaagcacccatggggac
atactcatcagctctgaaactctgaggatttctgtagctgtgtggatcccaacagtgttc
aacacacatccagcagccatcaaagaaactaaggagcttttaagaaggaaaacctaatct
ttagaaggcaaatgctgttaataagcagggaggcatttcatcttttatctatgtttttca
cacgctcctgaactgaggttctgtaatgtaacttcctgtgccgaattaatatcacaatga
ctaggagccggcagagggcagggctcaaggctgccacataaaaccagacatatggcacaa
accgcagcagcactgcccacagaaactgtgtctgtgccgacagaagtcagagaaccacac
gatacctaggctgaaagggaactccgatatcatgctgaatgaacacagccccttcatttc
acaaatgaggaaactgaggcccagtgaagccactgacttttccaagttcaaacagctcat
tagcgctgatgtccagaatgaatggagcctcctgactcccataacagccccctgctttga
aagagaaaattccaagttgcatcttcaaagccaatttgaagccactacctacttttcaca
tgttaacacaagagctcaaggcccttaatgagataaagagataatcagggcaaaatgaag
ggagggaggcatattcgcgactgccaactgcagccacgggtgtgctgcctgctggaaggg
attaccaggcaaaaggcttacaggaattcaaaggagatcagagcctttgtgagcatgaat
agtagctccagtcagcccggctaaagggcgaacaatgccctgcctgggggacataatctg
atccccagctggaggaggaggaggtttccagggctgcataagcagtaccttaagatggga
ctatttttagagcccgcagccatctctgagtctggcaggagctgagcaggatggatgagg
acaaatgacagcctcactgggcgctcacctgatgcaggtacgcctcggggtgcacaacag
gatgtctgaagatctgggcctaaaaataccttcctcgatggccttttaaatgccttaggg
atggcaccatgtacagattgcatcgcctgagtgtgcaggggcagagactgattgcagaag
gcggcaaggctgatgagcaagacaaggatgacaccaactctcttatcctccaggcactgg
tgaggggcacccgcgcctctgacaagctctgctggccaggaggcagcaggaggtggtgcc
agcatcacaacaggctgctgccccaacaggaagggggtgctgagaagtggaggtgtcagg
ggctcgctggccgtgagctccagagacacagtgggcacaagcatgatgtgccaatcagag
cagtctagcccagatggagctgcagcagaggccaagagagaaaaagacaggcaggctgct
cagcccctactccacatgccagaaaggctcaggacagacagaaagctggcccgatgacca
ccgtgcagaggcgtggcctctctcggctcttcacctaagccagctcacaggcctatggcc
cctcagtttaggggaacccaggtccccttggggaaggacccgtggctattttataggaga
gctgaccatggggagagggaactacccccacaccctgaatcaatgccagtcctaCTGGAC
CCAACACATCACAG
Primer
(+)cccaatcatcttcagcttgc
(+)ctgtgatgtgttgggtccag


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