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Mouse element [ mm1382 ]


Position: chr10:69,105,457-69,109,712 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Ank3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGGCTTGCTTGCTTTCTTCTtcttcttcttcttcttcttcttcttcttcttcttcttctt
cttcttcttcttctccttctccttctccttctccttctccttctccttctccttctcctt
ctccttctccttctccttctccttctccttctcctcctcctcctcctcctcctcctcctc
ctcctcctcctcctcctcctcctcctccttcttattttgcaattttgtgtacctgggtat
tttttcctgtgtgtacatctttgtaccatgtgtgtgcagtgtccatgggaactaggaaag
gaagtcaggtgccttggaactggagttgccaatgcttgtgagccaccactctggtgctgg
gaattgaacctgggtcatctgcaagaacagccagagcttttaactgctgagccacctctc
cagtcccgaggtgggctttcttattaagatttggttcaaggatattgaaacaatagcagc
aacagcaaaacccttttacacacacaaccccaaaggagtatctttcttgctgtgttgtgg
gacagatgtagctttatactaacatgtaacttgtttcaatgtaagaatatggtcacattt
tcctgacttagtccttttgacgagcgatttaaaaacctgcttgatgactttgttagctac
agtttaaggtttactaagaccttctttggctgttgttgatgctttaattcttattttttt
ggtaataattcctttggtgtgtgctttaggcacagaaagtctttgtgtgaactccagcag
ttcaagcaaggcgaaagatctcatctcccagatgaccaggtcaagttaaactccacagag
gtacccttttgtttgtccattgaaagcatcacccaggatgtcctagtttgtgccgagcca
aaagacgacctatttttgtcctggtactttgaataggccttctctctgacaggggctgcc
ctgtaagctgacctccctggctttcttccctgttgtaagggaaatgttcttcctgtcctt
atcagtgctggattccaattttgtgaggcctgagtagtccacccagacttaggcagtatc
ctaagaggatggagaggctgccattgataggaactgaagagcctgtctgcaagatgagga
agatgtccttctagtctgtctcttcttcctgcttcttttctgggggtggtgtcttccccc
tcttccccaagtcttgttttcctgtggctatgaactaacatttgaatgtcacgggaagac
ggagagcagcatcttcagaagatgcggcctctcctcccgagtcagcaccggagtttgctt
cttatcatccaactgctattatgatttgggctgggacaaaaatacatcagaggcagtcag
ctccgtgtacgtgcattgagagaagggaagagagagaggtgggtaggaatgattttaaat
agacctcatttgcacagcagaaagatgagcccagctgtgtgctgttgctgggctttccat
gatgacaagctagccctgctgtggggaaggtggctcagtcaggaaaggacctgccacaca
agccaggggacctgcatgccagtcccagccactgcataggaagccacatgtggtgaacac
ttgcagtcccatcttagaggaggcgggacctgaagattcctggtgctcattggctagcta
ggaaaataggcaagaatcagtacccatcgagagacattatctcaaaaacgaatggcatct
aaggaggaatagctccggaggtagttcccagacctctgtgtagatgtacaaaccccacaa
agatgggggaaaaaaacatcaaggagtcatcttcatcctgaatgtatttctggttttttt
gtgtgttcatttttcttctgcactgtcttgttaccagtgttcaggtttagagaaaccgtc
ctggtgaggctatccagcattgttgggaatgtttgggtaacaaaaacaaacaaacaaaca
aacaaacaaacaaaaggatgaatagtgacatcacaatactccagaagcaatcccagtcag
agattccattgctgttgaacggtcctttcttttgttgtctattgagtcggtctgttgtct
ggagagggtcccttttcagtgagagtctgagaggaaaaggaaaattaaacccttgagctg
tctgtctgtcctggctcatattccagaacctactgaagcccaaagccactgctgtttccc
tgtgacatttccagggcccagtttgtctagagtacaccgataagccagaggctttacttg
aacatccgttgagaacagactgccaggaagaaattttaagtggctggaaaaaaaatgctg
ttaacgtgaaatgctaaatccaaacttgggagagttagggagaagtaggccctgggtctt
gctctccagagaacatccatctacacgtggtgagaaaagacccacttgtgcaatcaatcc
tcacaagcacactgtggctgcatgttattactattgattcctgatgtctcacaagtctct
aggtaacttgcctgcaatttaaattatagatataaattaaaattgtaggttaaaaatgtg
atatatatatatagcataagcttgaattttctaggtgtcaagatagaattggtaacattt
ttaaaacatttatgaaaaaaaaaaggtcttcaacttacctctccagttcacttggactgg
tgggtgtggaggtgagggaggaagggagggaggaagggagggaggaagggagggagggag
ggagggaatcaaaactgctgagtcagcacaccaggttgttttttccactgaaacaatcca
gcagaggacccaggctgggactctggtcattgcttgcttcctttgggcgtggctctgata
tctctgcgacacctctctgccagtgttaggtcgcacccctttgccgagtcctccattaga
acacagatccatggagagagaggataccatgggccgcctgaaaggatccccattgcttga
gaactcattggaagcctgtgatcccagttggctcctgaagctcagccactatgtgtttat
gatccagaacctctgccccaaggagcaatgtcagctgctccgaggaaaccacaacaccca
gcacccgtggtgctgagaaccacacactgtgtggttagaccataatcgataaggctcctg
ctgctttgagtgtaggcggtagagaggcagtaccttgaagtctgtccctgggatggaatg
gctgaagagtgctttagagctggcagctcaacctgctttgctctgtcctcactgctaagg
atcaatgtcaccatgttacctccccaaagcaggacaagttcagtagatctaaagataaca
cgttaatgggttttgcagaagctcgcccggtttctttattcccctccgaaagcaagtcct
tctgcagaactcagggagcaaatgcttcagggatgagcccaactcgtgtacactggcgca
actctactgcatgtttccacatgaccttgccatgggcgtttcagcagatctttcagcgcc
gtggaaaaatggtagaaaccttgaggatatgcctgtcaagtccttcagtgttggcaaaag
tcactcagtttctcaagtgacttttcttttttggggcaaggctgaagggagatgtcagac
acatcagccatcagccagtcaccagagcaaacagcctacagacacacatgagcacttgga
ggtgctcagaggccacacaatggcagcatgccagtggatatgacccagcactcgcagatt
gcgagagtctggatatcaccgttcatgggaacgtggagacatgactagaacaaggagact
gtgctctctctggtgtgcgcagggttggggggttctactttgcttctatactgggatgtt
ccaaagcactcaggtggcttccatggtacctgaaccccaagtgcttaagagatgtctccg
tggcgatagatggaaccctggaaaggtcacttggatttccattctagcttgactcaattc
tagaacactgattttggccagtaactgaaaattccaccttaaatgatacttgaaaattcc
accttaaatgatgcttccctgcctgactgtgtttaccagtttgctaggagatgcgtctac
gaaccaactgcaggtcgattggcttaaacagtagacatggattgatggcctcatggtcca
ggaggagctcactaatctagtcacctgggaagatgcTCAGCAGACTCACTTCCCTG
Primer
(+)GGGCTTGCTTGCTttcttct
(+)CAGGGAAGTGAGTCTGCTGA


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