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Mouse element [ mm1381 ]


Position: chr19:10,734,265-10,738,378 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 4930524O05Rik - Pga5

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTCTCTGGCCACTCATCCTTctttggaagtttagatgaaggtaccttgctggcattgtct
gtcattcagaccagggcccaggtgtttgggcctctacccaacaatacttttctgcccact
attggcaccaaaggccctagagagctctgctactggttgttgggatcctctgggtttctt
cacgggtgtctttctgcttcttcagctgggagaggtgagctgtgagacggtaccctgccg
gccaatctgtactgacccctcctgcccaggtaagcaagccctgcccctgagctttcttgt
catcttccactgcaaaacttgtcagaaacataggccttagacgggagcccaggcttgggc
agagttgccgaaggtcacccaggtgtggtgggctgctagttctgagctgtttattaggaa
caggacccagtgatctgttgtatagctctgaagtcttgatgtggaccacagctggttacc
caggaaggctccccattatctgtaagacctcaaacgtgtttgaaactgtggatggaactg
agccctatataatagcactgtcaagccaacaacagagaggctcctagctgactaaccagc
tggtagtactgacatatggatgtactggacaaagtatgagtcacaggttggacagggcag
gatgggatgggaggtaccaccatgctacacataatagcacacaatttaatatgagttgtt
tatttctgaaaacagcaattgatcatggtaattgatcatgaagtggcagaaaacaaaatg
ttggtaaaggagggactcccctcttctcttggtctgatttttctatctcacactcactcc
ctcatccctctcttctttctttcattccttgtattcttatctccccaggccacctttctt
tcctttcttcttttctttcccttccttccatacacctgtaatggacctcctgtgcaaaat
tctgggtcaacttttcttttttcaaatcttgtgggctgtgtcaggacagtctccaaaact
gtttagaattctaatttttccagtttactcagtgcacagatgtgttttctttgtatgctt
tcaacattcagaaaggtgatggattttcccactgtcttatggccaacattgcttcctggg
aagtgtctttttttttttaaatactttttttctttttcttttcaagacagggtttctctg
tgtagccctggctgtcctggaactctcactctgtagaccaggctgaccttgaactcagaa
atccgcctgcctctgctgggattaaaggcgtgtgccaccactgcctggcttttttttttt
tttttagatttatatgaatatactgtagctgtcttcagacacactagaacagggcctcag
atcccattacagatagttgtgagccaccatgtggttgctgggaattgaactcaggacctc
tggaagagcagtcagtgctcttaactgctgagccatcgctccagccaggagatgactgtt
ttacatctttggccttccaagggcactccaagatcttgtctgctccgggaaagtagagaa
ctgggaacagtcctgaggacccctgggaacttagagaatccagattccttttagccacca
taggctcctctacaatggatagctatatcatccctcaggcttccagaaactgttgccagc
acaccagacagccactaagcatttgcctctaacactcactgagcaagcaactcagccaga
gtgcttgggcgcaagggtcttatctctgttttccagatggggttgcagagcccgggggag
ggagtttctagttggtggcactagaccctttcttttcttatcctttgctctctggtactc
ctccgtgtgtgaaaactaagacccaaagaggacacatgctgagccaaactcttttcccag
agacactgtctcagctctgctcatcacgtcctgttaccccgactcatagctctctgtaaa
aggagataccaccaggctggagagatggctcagtggttaagagcactggccactctttca
gaggtcctgagttcagttcctagcaaccacacagtggctcacaaccatctgaataggatc
tgatgccctcttctggcatgcaggtctatatgcagatcgagcacttaaacattaaataaa
taaataaataaataaatggaatgccagtgtttcatccaaagaggatggggattgcttcca
tctgatgacttaaaaataatacaaagaagctgggtggtggcagcagcagtgataatgcac
tttttaatcccaaaccccaaaaacccaccaccaccaccaaaacccagaagggacggttga
gataaggcatttgcttcaaagcttgatgatgcaaagcttggtctccagaacatatgtgag
ggtgtggtcacagggggagaagaagctaagcataaagaaaagacctggtggcaagcaaag
gagagagggacattagtaaagcttcacccgagggaagtagataccctctcctctggtgtc
ttgaaatttgtcctgatttccacaagtatgctgtggcgcgtgcacgtgcacacacacgca
cacacacacacacactcacagaggcacacaaatacacacatatgcaatgcaataaaaata
attttcttcagacacaattcacatatcacccagttagttcacaaacttaaagcatatgca
cagcggcatctaccacccctcaggtgaccctttcttaatgttcctttctcctttgcccct
gtgaagcacatctttacaacgcgagaggtggtagcctgggactgttattcactcggcgcc
cctgggatcgaacctagttcactgcacttgtcttgtgtgcacgaagccctggatcagttc
ccagcaccacaaaaattaggtgtagtgatgcttgtctattgtcctagggtgggagaatct
aaaagttcaggtctgctgggctaggtggcacaagcccttaatctcagcaggcaagagctc
tgtgagttcaaggccagcctgatcaacatactaagttctgaagggactctggccagtttg
agtgtggcaagcatggctctggcaggcttcctctttttcctcaggtccctctgtcttgct
gaaaaaccattagattaccttcccaaggctaaccgctaaggtctattcccttatctggcc
aattcctcctcctgaggctgacaaccaagatccagctatcaaagtagtaaagtccagcag
tcaaaagccccctttgacccgactaattaacacgcccaattaaaatcaaacaccctatcc
tagcatggggtttcctgtttccttttataaacagtcattttcctatatgccaagtctgtc
tcctctctatccagaggcagtcctttgacctccaggacaaaaacctctttcccctctccc
ttgttcccttcccctttttttctcatcctctttttcccatctttgtctcttattgcctgc
ccattgttcctcttgggcaaaaaacaaacaaaacaaaacaaaacaaaactcctttgtgct
gagaacttggtcttggggtcctgagtcaataattttcctttcaagttctaggacagccaa
ggttacatagagagatcgtgtctcaaaaaaaaaaaaaaaaaaaaaaagagaaaaaaattc
aagtcgtccttggctgtccagtgagtttgaggctagcctaaatcatatggaatactgagt
ttttttcttaatagagtgtatatttttggatagcgttaggttggatagcaaaattgaatg
gaacatgcagtgttcctctgttttctgactccacacaccaatttctcccactagcaaaat
gccacagtagagtaatatccatctgtagttatcggtggttccacggtgacctgtcactga
tgcccactggcctgagggcttaggctaagtcatcctgtgcggtcctgcttctggctctca
gttgttgggacgcccattttgcaagtgggaaaacaggcccagcgttgactctttctgtat
cctttgctccctggcactcctctatgtggggaaactaagacctaaagaggagcatgctga
gccatgtgcttcccAAAAGTCACAGCGCAAGGTC
Primer
(+)GTCTCTGGCCACTCATCCTT
(+)GACCTTGCGCTGTGACTTTT


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