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Human element [ hs1373 ]


Position: chr5:124,682,735-124,685,593 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101927421(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGTTGAAACTGCAGCAAACAgatgccttctttatagctggagaggctgtgagaagagact
gtcctgtgggcaagaactctggatgtatgagacagtgtgccaaaacagttaacagaaatt
atgaagcaatttcgatttatgttgcagcaaaaagaagaaggaacagaggaaattgaactt
ccagtgaggtctgataattaaactcaggcatactgacagggtaggtgaacacaacagata
aataactactttccggtaattataaggcaggatggtaacatattagacaagctggcttgc
tcggtattttcaaggctgacatttcgattctaggggatatttggatctgtgctaacagat
ttctttctttttccacacttgcttttccttttccactccctattgcttgctgaaaataaa
atgtgattttaaagtgccactgttcagcatgtttcatgcgtctgcttcgcctcacatagc
cgacctcaaaacccactgctgctggacgcagttgctgaagtggtgtctgcttttctaaaa
actgtaattatttaaaagattttaatcagatgtcccctattagaagaaaatggtgcaaat
cacatagtccatttacaatccttccttggccatagactgctaaagcttttaacaaatcat
ttcatagcacaaacacttcttttcacaagaaggaaatggaggcaatgggttcttgtctaa
gacgcactgttttcaacagaaataaagcagacacttaagtcaagggaacaaaaccactct
cttttgtgaatggggatcactctcagacacccaattttccttctgtctttaagaataatg
ttacaatacttttaaaaggggaatttacataatagaatacagatgttgcccttttctatg
tgatgtgtagactgtagattgtgtgctatatagacttgattttcaggcagaaattttaaa
atgagtgtttttttcatggtctgtcctataatcaaaccatctcatgaagaatgaagatct
gtccctgtgggtctctagcctcaaggatctgctgtgtcgtgactcaaattccagatggtg
tagatttactttgttgacccaaaccccatgttttctttcttttttttcttttaatttaaa
aaaacagtatcataatttattgattgctcttggggaatgaacttccaatgcccatcttgt
ggcctggcagggagaaatttcccagttctgtttgagcgagctgtccactccacttggcac
ttgaacaggctaaaacggaatgtcttttgttgtaaacacctaatttgttcattttgaact
gtctgagtaactagatcaaagaccagtgtcaaatgcccaaagcagtgtttgtcagcagtg
gactttttattcttcttgttctatagcaactgaaagagaaaaagactcgtactgtatttc
cacaaaagcgtagggaagctcgcgttggcagcctcttgcgacagaatgaatacatgctac
tgagtacagaccatttgtctcctgattacaacagaccccaggggaactggtgttggcttt
gaattccacctctcttttactgagcgcctcctcgccgtgatggttccacccccaatcctc
acagcacagagcgtcagggactcagatctcctctctgctgtgggttttagtcagctttct
aaattcaaacagggccctcttgtttgaaatgtgttgacttgtcttgaacagtaacatata
tttttaaactattctcatttggaattcagcagtggccataatgaatgcctttagtgctcc
tgtgtgtttcatatgcatgataacaagggcttcggtgtagaggaaggaaacagagaatga
cgacctaaaaagtcacccagttcctaatattaaaaatggtacaaaaatggtagagcatat
gatggtcttactagttatgtgtgaacccacctgatcatttttcccattgatttataaggg
ctcacgttgtttttctccgtgcagaattgttgtttggaaatggacaagaatgtgtcttta
ttatgctaagagtacagctttattattaggcagtcttgagggctgctgggatgcattctc
cttaattacacctattttcactgatattccctaagaactgctctgctcatatttccattg
gaaggccaagttcagcctgaaaggttcacttcctacttaacagcagttgcagtcattaac
atttttttttcttgtttagttttgctttactgttcatttcctttaaaggaaagtagatca
taaaacattcgtgaaagtttcctttatttcagattagctgaatttattttacacatttgt
ctctgttttttcttatattcttattcactttattgtctacctttgcagttatttttttct
tatattaagaaagagaaaagaagcgagctgtcatttggcagtctcttttccattatgttt
gcactgctgggaaacgctggaacaaaggcattcaaagtgttactgaatggggctcagcat
tcagccctgctggtgaggctgcaatcagtccgactaggatgaaaatgcgtgcttttcaac
actggttggagatgtttgtatttatctttggaatgcatgcctggtccatgcagtcatgtg
atgtgtttttgccatgtccttatgtgtcccagctttttctgtggtaggatggaagaaatg
gaatgtgacccattaacccttagtcggtatgaagtagtccaacagatacttctcaaacac
aaagagtccctgctcacgtcaaagtcaatttctaaaacacgtttttatccgggatttagt
tcctgtcctgttctagccaGATGTGCATGTGGACAAGCT
Primer
(+)ggttgaaactgcagcaaaca
(+)agcttgtccacatgcacatc


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