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Mouse element [ mm1366 ]


Position: chr5:119,115,486-119,118,887 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Med13l(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGCATGTGCGTTTGTCTCAGctgacatcactctgccaattggctggagtctgcagaagtg
gcaagaaactgcagcacactaccagaagttttttggtgagtttctctctacggagtcctg
acaaatgcagcattgtaaggtggaccaatagatgtgcgttgtattgaacctaaagtattt
tgttcagataatagaaaataaactaactccatggagaagttacacattcctctccttgaa
ggtaaagagtaatttgattttgctaagagatttagcagaattgattgtagccaattgcaa
gtttgaaagattggaagcccaatagcagtatttaggttgttagagtacatttaaaccaaa
aattgtgtgtgtgtgtgtgtgtgtgtgtgtgtacatgtgtacgcatacatatagtggcat
cgtattttcactgttcatgtgtgtgaattccttttcgctttgtagcacatttgtaatgta
aagtacagtaatgctatggaaagcctaaaaagtaattgttttttaaaacgctaattatat
acaatattagcttcaaactgtcccttctgctaatttgcctgcactcactccacatctagc
acctggtttcctgttatgtaccaacgtctgcacaaactctggctggcaggcagcacactg
cttgctcccacaaagggtgcagcccctgggtgtggaaggactgtccacttctggaagtag
caggatggctgtgcttgctctcaaggcctctgtcctcacagcggggaccagtgcttctga
ttgcacgctgggccaagtgatgagtggatataattgttctgcagtctggggtttcttcaa
aggagtatttttaaaatccacattaggaaaaaaagcttggaacaatgtttatgtaaatga
agacaaactgtttgccaggtgagagaggtgcagtagaagtgtggtaaaggaagatggagg
ggacggagggatgctgctgtaaccgtcagccacagagttttggtgagaggagcagaaaag
caaggccagtgagtagtccttagctaaagcacgaccaaagagtgtctgtccactgtttgc
ctgagatgagaggagtgcgcgcccgcgtgtgtgtgtggcgtgtgtgtgtggcgtgtgtgt
gtggcgtgtgtgtgtgtctgcctcaggcggctctcactgtaccgtggaccgccactgtgc
cacccttcagggaggcagggcacgcagagcaggcgcggtctctgagccttctgtctgctc
tttctctttccttcttccctctccgttctctcctcccttccctcttccatgttatttttg
ctacatttgctgttttaacctgtcatttacaaactaattactatgtcaccatggctggcg
gctcatataggcgaaatctgtctcttaatcaaaggtgattacagtttttcctgtctgtaa
atgtgcttgttgagtaacgagagagcattattctcaggctgatgtgcgaactgaaaggca
gcaagcagccgcagcattgttatctcctcaggcgtggctaatgaatcgtgtttcagtgtt
ctggtggtcatgccagacagtgcactccaccagggctaagcctcctgtaaactgctccac
aatattattgcagcaagaacagcaatgctggctgagctgggggggggggggggttgccaa
gaagacagctgcggttcagacagttacagagtaggggtcactcatagtgatagctctgac
agccactgttttagcttcagtgtaaaagacaagtcaggacctatcctgtcagcaccgagc
ctgagtgtgtttatgtttcaaagcaggtctcctctgaagagaaggaaagaaatggttttg
atttttattgtttaattgagagcaacattgaaacccaggggttaagtcttcttgactaac
acagccatcatagaggaaagtttatcttaagcattgatagattgaagtaaaactgcccga
actgagtcagatgtgtgtatcatatacgtgtgtgctgtatgtgtgtatatcatatatgtg
tgcatcctgtgtaccaactacatgcatgcttttcattaacattgaatactgtacatacct
gtaattctgaaatctggaagctgaaggattatcatgagtttgaggctagcctgggctata
ctgtgataatctgtgcaaaaacatcccaccccccctttaatgtatatctcatgctgatcc
ctggtaattcctgaacatgtagttgtttaataaacatcagcctaacttaggatgtttaag
tggtgtgtgctcataagggaagtctggagtcaaccatgaggtgcagactgccctcccggg
agccagaggtctctgccaggtgggggctgcccttccagagcagttttgcattaacagcaa
aagatacaatggtaatgctcattctatcatgcttgaaaagataggtgagtggggacgcgc
tgcgtttggaagacagtgtgattcgacacttgacgatttctcttgcagtgtgagtgatca
cagggatgtgggctgctttttgcacagctgtcttctgaaggtcttgctcagtgtatccag
aagtctaattctctgacctcctttagttgaaaatttactggctttacacaagtcctgtga
tccattgaaatgctaacgtgggtcatgtctcagctgccacatcgctgagcagaaaccttc
attaaaattctggttatcctgcaactgacagaggacccatgctgttagaggttcctaagg
aagatgttagcctggtgagatggcatgtcacagccatacttctgtctgctgagcattatc
agggttgttattcctgaacgttgcagacaggtcagaacaaacagcacttctacatctgtc
ttctagctctactattgtatcctctgatccatatttgactgatgaattgacagtggacaa
gctaaatgcatttctgatatagatttgttaagtgataccaagtgttctacatccacgact
agttcaggagagcggcgtaccgagtaggtttgatttgatataaataagtccatttagtta
ttaatgacttcaaatagattttacaaggcaatcaatggcggcagaatggtgatcagtcag
tgatactgtgtgtaattggatttttatgggtatgatgctgtatttcagaattaatgtggc
attatgctatttggttactcagttctttgttaagtcaatctcttagaaatcagatatcaa
gaattgagatctttaagtattatttggcgcagtccataggtaagttgataaatgttgtct
tgttgcagtgtctgtttattttatagttctcaggaagtagatgtgagaatcggagagttt
agtttgtaagactgttttatgcATTGGGCAGCAGAGTTGAAA
Primer
(+)agcatgtgcgtttgtctcag
(+)TTTCAACTCTGCTGCCCAAT


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