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Mouse element [ mm1362 ]


Position: chr8:11,356,668-11,359,383 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Col4a2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCTGCCACTACCTCTTGAGTactagggttaaaggtgtgtacaccatcactcgcagcctca
tttcttgatatttaaaatctccttggtcccttgctatagattttaccaagggtgagatgg
tttgtgagtgatgggggtgtccgacctcacacactgctccccgggccaggaacaggctct
ctaagctctgactgacacagcctccttatatggacacaaagcagatcaattggtgctgtg
cagatatctccagaaccaggcaaaggagatggttagaccccggaggatgctgcattctgc
ctcctgagataagctggacaagagcccaaggaacagttcctgcttggcatgccgaacggg
ctatgattacccagagcagagcctacagatgagaggtttgcgggatgtctctctgagggt
gttcttccccctaaaggccactcatgctgtctgaacagactcgtctgcagggcagtgtgc
gctcacatgccatacagtatcttcttagaggttccaggaaggagctgtcaagggcctcat
catttcccagtgtccctcccgaagtaaacacctggctctggtttagccgtggccacataa
aataggaagctaactcttctcttcacctgaccagtctggtcatcagagcttagcctagtg
tggcttacttctcatcattaggcagaatgtcaagacagaggcagtgacacccaacgtggg
acttcaccttagtggcgtcctctcaatatgcccatgctcactgggccagccacacagcag
ggcacactcccatgattcaatctcatccttgcacctgtgagaggacagaaagataccatg
aggatgcaggctcagtcatcacacgacatgctaatccaagtagagcacactatatgctgc
agggtacgacagagctggcagggagactcatgttgacactggtgtttttctgaaggtgtc
actggacattttatcaaaggtattttcttcccctggccaactatgtgtgttaatctcaaa
caaggatgaagatatcgaatccgtttccaggtacatgcacgcagaaaggatttgtagcat
attcacccacacgtgtttctgcagaaagcagggctacttctgaactgctcttagttctat
aatgtttttcttaaataatgctattataaaaatagtggcagggcggagcctgactccagg
gagcctgtgcatggtgagttctttcccacagcttcccctggggtcacttaccatatattt
tcccccacggtgctgctgtagctgccacgcagcctccctgcaggctgtgtgctctgctaa
ctcagccttatatggacaaggtacccttgttactgtgttctctccatggtgacagccaac
agcagaaactctgtcactggataacttttggactccgaggagaaatcacaaatgcactgt
ggtccagttccaagagaatgctcaagttacagagtgagtgggtctgtgtaaaatccatag
agcacaattctccaccccgtgtgctgagctgcagggattgggggtgggggtggggggtca
ctgcatcccaccagtctctagaaaattcctgtgaggcacaggactggagcaggaagaggc
gggactgtagcagggctctctgtccccctcactccctgctcagaccaggagcatcgaagc
aggaggctaaccttcctcttctggtgaattacgacacacatagttctaacagatggttga
agacctcctaacctgccctttcttatatacactgtgaagccagcaggcagcccagtggaa
aacatgcagtgaattccaccacagaaatgtccaaagccagggcaacatgatctaacaggt
taataaacagaaaacagagagggacagctgagctccataactctccaaggttggtcaaga
gcatggttcccaatccccctagtgctgtgagcatttaatacctttcctcaggtagtgggg
acccctgtcttagtcagggtttctattcctgaacaaaacaccatgaccaagaagcaagtt
ggggaggaaaaggtttattcagcttacacttccacattgctgttcatcaccaagggaagt
caggactggaactcaagcaggtcaggaagtaggagctgatgcagaggccatggagggatg
ttacttactggcttgcttcccctggcttgctcagcttgttttcttatagagcccagggat
ggcaccacccacaatgagccctcccacccttgatcactaattgagaaaatgccccacagc
tggatctcatcgaggcatttcctcaagggaggctcctttctctgtgataactacagcttg
tgtcaagttgacacacaaaaccagccagtacagccccaaccataaaatcattttcatcgc
ttcttattaactatttgctactgttatgaatcataagtatgtttggagatagcggtttgc
caaggaggtcacgacccatgggttaataaccagtgagtttgattttagttttttgggttt
ttttttgggggggggttgttagttttttgtttttggtttttggttttttcagttagttag
ccatgatcctctatcatgtaatgtttgaccatgaattctggttaagtccattgcctccat
tatttttttttttaatttttaaaatgtcatcattgcgtgtgcatgatgtgggtgccTCAA
GTCAACGAGGAAGGCT
Primer
(+)cctgccactacctcttgagt
(+)AGCCTTCCTCGTTGACTTGA


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